Mustela nigripes (black-footed ferret): 132005043
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Entry
132005043 CDS
T09425
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132005043 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132005043 (CNOT3)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132005043 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132005043 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
132005043
NCBI-ProteinID:
XP_059237755
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Position
17:complement(618308..631529)
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AA seq
753 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAMPPSYPPGPPPAASALSTASGNNGASTPAAPASALGPKASP
APSHGSGTPAPYAQAVAPPAPSGSSSTQPRPPSVQPGGGGGGGGGGGSGSSSNSSGGGGP
GKQNGATSYSSVVADSPAEVALSSSGGSSASSQALGPPSGPHNPPPSTSKEPSAAASAGA
GGVAPGSGNNTGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSTAPEIKAPEPL
SSLKSMAERAAISSGIEDPVPALHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVC
PLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTV
EFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatctggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctccaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagact
aaagcctacagcaaagagggcctgggcctggctcagaaggtggaccctgcccagaaggag
aaggaggaggttggccagtggctcacgaacaccatcgacaccctgaacatgcaggtggac
cagttcgagagtgaagtggagtcgctgtccgtgcagacacgcaagaagaagggggacaag
gatcagaagcaggaccggatcgagggcctgaagcggcacatcgagaagcaccgctaccat
gtccgcatgctggagaccatcctgcgcatgctggacaatgactccatccttgtggatgcc
atccgcaagatcaaggatgacgtcgagtactacgtcgactcgtcccaggaccccgacttc
gaggagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagtcacatggaggatgagatcttcaaccagtccagcagc
acacccacctccacgacctccagctctcccatcccgcccagcccggccaactgcaccacg
gaaaactctgaagatgataagaaaaggggacgctcgacggatagcgaagtcagccagtct
ccagccaaaaatggctctaagcctgtccacagcagccagcaccctcagtccccggctatg
ccgcccagctacccacctggccccccgcctgctgcctccgccctgagcactgcctctggc
aacaatggggcctctaccccagcagcgccggcgagcgccctgggccccaaggccagcccg
gctcccagccacgggtcaggcacccctgccccctatgcccaggctgtagccccgccagcc
cccagtgggtccagcagcacccagccccggccgcccagtgtccagcctggtgggggaggg
ggaggcggcggagggggcggcagcggcagcagcagtaacagcagtggaggcggaggccct
ggcaagcagaacggcgccaccagttacagctcagtggtggcagacagcccagcagaggtg
gcactcagcagcagtgggggcagcagcgccagtagccaggctctgggccccccgtcgggc
ccccacaacccacctcccagcacctcgaaagaacccagtgcggcagcctcagcgggagct
gggggtgtagctccaggctcagggaacaacacagggggacccagcctcctggtgccactt
cctgtgaaccctcccagctccccgacacccagcttcagcgaggccaaggcagccggtgcc
ctgctcaacgggcctccgcagttcagcactgccccggagatcaaggccccagagcccctg
agctctctcaagtccatggcggagcgggcagccatcagctccggcatcgaggaccccgtg
ccagcgctgcacctgactgagcgagacatcatcctgagcagcacatctgccccaccagcc
tccgcgcagccgcccctacagctgtcagaggtgaacatcccactgtccctgggcgtgtgt
ccgctggggcctgtgcccctcaccaaggagcagctgtaccagcaggctatggaggaggct
gcctggcaccacatgcctcatccctcagactcagagcgcatccggcagtacctcccccgg
aatccctgcccgacgcccccctaccaccaccagatgccacccccacactcggacaccgtg
gagttctaccagcgcctgtcaacagagacgctcttcttcatcttctactatctggagggc
acgaaggcgcagtacctggcagccaaggccctgaagaagcagtcgtggcgattccacacc
aagtacatgatgtggttccagaggcacgaggagcctaagaccatcaccgatgagtttgag
cagggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttc
acctttgagtaccgctacctggaggaccgggacctccagtga
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