Mustela nigripes (black-footed ferret): 132005104
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Entry
132005104 CDS
T09425
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mnp01001
]
132005104 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132005104 (TRIM28)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132005104 (TRIM28)
Protein kinases [BR:
mnp01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
132005104 (TRIM28)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132005104 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
PHD-1st_NSD
zf-C3HC4
YaaC
Motif
Other DBs
NCBI-GeneID:
132005104
NCBI-ProteinID:
XP_059237857
LinkDB
All DBs
Position
17:13103071..13109168
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AA seq
835 aa
AA seq
DB search
MAASAAAASAAAAAAAASGSPGPGEGSAGGEKRAAASSAASAASASASASSPAGGGGEAL
ELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAAANSSGDGGAAGDGAVVDCPV
CKQQCFSKDIVENYFMRDSGSKAAADSQDANQCCTSCEDNAPATSYCVECSEPLCETCVE
AHQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKD
HQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAI
LQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNT
ALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTG
PTSMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSG
LMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTAPPG
APGAPPLPGMAIVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASPSGSTS
SGLEVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVP
GEEWSCSLCHVLPDLKEEDGSLSLDGGDSTGVVAKLSPANQQKCERVLLALFCHEPCRPL
HQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKA
DVQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQELSSGPGDGP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcggcggcggcggcggcggcggccgcctccggcagc
ccaggcccaggcgagggctcggctggcggcgaaaagcgcgccgccgcctcgtcggccgcg
tctgcggcctcggcctcggcctcggcgtcgtcacccgctgggggcggcggcgaggctctg
gagctgctggagcactgcggtgtgtgccgggagcgcctgcgcccggagagggagcctcgc
ttgttgccctgcctgcactcggcttgcagtgcctgcctcgggcctccggcgcccgctgcc
gcaaacagctccggggatggcggtgcggcgggcgacggcgccgtggtggactgtcctgtt
tgcaagcagcagtgcttctccaaagacattgtggagaactactttatgcgtgatagtggc
agtaaggctgccgcagactcgcaggacgcaaatcagtgctgcactagctgtgaggataat
gctcctgccaccagctactgtgtggagtgctctgagccgctgtgtgagacgtgtgtggag
gcacaccagcgggtgaagtacaccaaggaccacaccgtgcgctccactgggccagccaag
tcacgggacggtgagcgcacagtatattgcaacgtgcacaagcacgagccccttgtgttg
ttctgtgagagctgtgacaccctcacttgccgggactgccagctcaatgcccataaggac
caccaataccagttcctggaagatgcagtgaggaaccagcgcaagctcctggcctcgctg
gtgaagcgcctcggggacaagcatgcaacgctgcagaagaataccaaggaggttcgcagc
tcgatccgccaagtgtctgacgtacagaagcgtgtgcaggtggacgttaagatggccatc
ttgcagatcatgaaggaactgaacaagcggggccgtgtgctggtcaatgatgcccagaag
gtgactgaagggcagcaggagcgcctggagcgacaacactggaccatgaccaagatccag
aagcaccaggaacacatcctgcgctttgcctcctgggctctggagagtgacaacaacacg
gccttgctgctctccaagaagctgatctacttccagctgcatcgggccctcaagatgatt
gtggaccctgtggagccacatggcgagatgaagttccagtgggaccttaatgcctggacc
aagagtgcagaggcttttgggaagattgtggctgagcgtcctggcaccaactcaacaggc
cctacatccatggccccccctagggctccagggcccttgagcaaacagggctctggcagt
agccagcccatggaggtgcaggaaggctatggctttggctcagacgatccttactcaagt
gcagagccgcatgtgtcaggtgtgaagcggtcccgctcaggtgagggtgaggtgagtggc
ctcatgcgcaaggtgccacgggtaagcctcgagcgcttggacctggatctcacagctgat
agtcagccaccagttttcaaggtcttcccaggcagcaccactgaggattacaatctcatt
gttattgagcgtggagcggcagctgctgctgctggacagcctgggactgctccacctggg
gcccctggagccccgccactacctggcatggccatagtcaaggaggaagagacagaggct
gccattggagccccgcctactgccactgagggccctgagaccaagcctgtgctgatggcc
ctggcggagggccccggcgctgagggcccccgcctggcctcacccagtggtagcaccagt
tcaggtctagaagtggtggctccagagggcacttcagccccagcaggtggcccaggtgcc
ctggacgacagtgccaccatctgccgtgtctgccagaagccaggcgatctggtcatgtgc
aaccagtgcgagttctgcttccacctggactgccacctgcctgccctgcaggatgtgcca
ggggaggagtggagttgctctctgtgccatgtgctgccggatctgaaagaggaagatggc
agcctgagcctggatggtggtgatagcaccggtgtggtggccaagctttcgccagccaac
cagcagaagtgtgagcgtgttttgctggctctgttctgtcatgagccctgccggcccctg
caccagctggctactgactccactttctccctggatcagcctggcggcaccctggaccta
accctgatccgtgcccgtctccaggagaagttgtcacccccctatagttccccccaggaa
tttgcccaggatgtgggccgcatgtttaagcaattcaataagctgacagaggacaaggca
gacgtgcagtccatcatcggcctgcagcgcttctttgaaactcgcatgaacgaggccttt
ggtgacaccaagttctcagctgtgctggtggagcccccgccgctgagcctgcctggtgct
ggcctgagtgcccaggagctatccagtggtcctggtgatggcccctga
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