Mustela nigripes (black-footed ferret): 132005210
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Entry
132005210 CDS
T09425
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
132005210 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
132005210
NCBI-ProteinID:
XP_059238067
LinkDB
All DBs
Position
17:4410941..4455788
Genome browser
AA seq
2182 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGIGPGSDYII
KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPP
PAISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRG
GPFNPSSGGPLPSSSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPP
QPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSGG
GGISSSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPAAAS
PTSPASPQPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGG
GGGGGGGSSSAGGSSAPSPAPAMSPVPPSPSPVPTPTSPSGPATLDFTSQFGAALVGAAR
REGGWQNEARRRSTLFLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRL
ESAGAGSGGGYGAYAAGSRAYGGSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAA
RERALKESSEGGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRE
LGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPPPLPGVNKAWRS
GAPEEPERLPLHVRFLENCQPRASGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGTEE
NGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPT
TPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAAPAPP
APQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGPAGGGGGGGGASV
ASGPELLDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGTSGGLRPGPSGGLRD
PVTPTSPTVSVTGAGTDGLLALSGCTGPSTAGMAGGPVAIEPEGPPVPLPSASSLPRKLL
PWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGS
GGSGDSHHGGSSYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLPTGSGV
PPSAAAASGATSPSASSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSS
LPILPSGPLYPGLFDIRSSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPT
RLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVD
LGVTRVGHRMNIDRALKFFLER
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggagcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctgcgcttcaaccctgatgccaccatctggacagccaag
cagcaggtgctttgcgccctgagcgagagcctgcaggacgtgcttaactacggtctgttc
cagccggccacctcaggccgcgatgccaacttcctggaggaggagcggctgctccgggag
taccctcagtcttttgagaagggggtgccctacctggagttccgttataagacccgggtt
tacaagcagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtctgacaaggtggcgcggctgctggac
aaggggctggaccccaattatcatgactcagattcaggagagacccccctgactctggct
gcccagacggaaggctccgtggaagtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgagcccgggatggcatgacagcactgcacaaagctgcatgtgcccgtcattgc
ctcgctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggctatggtggggggcgacccccgctgctgtgagctgctc
ctttacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcacctggaacacctgctcttctacggggctgagcct
ggagcccagaacgcctcggggaacacggcattgcacatctgcgccctctacaataaggag
acctgtgctcggattctcctctatcgaggagccaacaaggatgtgaagaataacaacgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactgggggagttgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccagcgctacttcgggccaacagtgat
accagcatggccctgcccgactggatggtgtttgccgccccggggacctcatcctctggg
gcccctggccctacttcagggccccagggccagtcacagccctcagcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggtgcacgggctcgctcccca
tcccgcgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccggcagggggcacggggggctcggggggccctgggggctcc
ctgggcagccgtgggaggcgtaggaagctctactcagccgtacctggacgctccttcatg
gccgtgaagtcctaccaggcccaagcggagggggagatctccctgagcaagggggagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggtttccctcggactgcctagaagaggtggcgaaccgctcccaggaaggaaaacaa
gaaagccgcagtgacaaggcaaagagactcttccggcattatactgtgggctcctacgac
agctttgatgccccaagaagcttgatggatgggattggcccagggagcgattacatcatt
aaggagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctg
cagtatctggagtctgtggatgaggggggtgtggcatggcgagctggactgcggatggga
gacttcctcatcgaggtgaacgggcagaatgtggtgaaggttggccaccggcaggtggtg
aacatgatccgacaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcac
ccggacatggatgaggctgtccataagaaagcaccccagcaggcgaagcggctcccgcct
ccagccatttctctgcgttcaaagtctatgacctcagagctggaggagatggtctccccc
tggaagaagaagagtgagtacgagcagcagccggcgccggtgcccagcatggagaaaaag
cggacagtgtatcagatggcactcaacaaactggatgaaattttggcggcagctcagcag
accatcagtgcaagcgagagtcctggacctggtggccttgcatcgctgggcaaacaccgg
cccaaaggcttctttgccactgagtcaagcttcgatccgcaccaccgctcgcagccgagt
tatgaacgtccttcttacctgcctccaggacctgggcttatgctccggcaaaaatctatt
ggggctgcagaagatgatagaccgtacctagcacccccagccatgaagttcagccgcagc
ctgtctgtgcctggctcggaggacatccccccaccgcccaccacgtccccacccgagccc
ccctacagcacacctccagccccctcctcctccggccgcctcactccatcccccagggga
gggcccttcaaccccagttcgggtggccccctcccgtcctcttcccccgcatcctttgat
ggaccctcccctcccgacacgcgtgtagggagccgtgagaaaagcctgtaccacagcgga
cccctgccccccgcccaccaccacccgccccaccatcaccaccatcacgccccgcccccc
cagcctcaccaccaccacgcccacccccctcatcccccggagatggagacgggcggctcc
cccgacgaccccccaccccgactggctctggggccccagcccagcctgcgcggctggagg
ggcggcgggcccagccccaccccgggggccccgtccccgtcgcaccacggcagcgggggc
ggaggcatcagctcctcccaggccccagccctgcgctacttccagctgcccccccgggcg
gccagcgcggccatgtacgtgccagcccgctcgggccgcgggcgcaaggggcccctggtc
aagcagaccaaagtcgaaggtgagcctcagaagggaggcggccttcctgccgccgcctcg
cccacgtctccggcgtccccgcagccgccgcccgccgcggccgccccctcggaaaagaac
tccatcccaatccctaccatcatcatcaaggccccgtccaccagtagcagcggccgcagc
agccagggcagcagcaccgaggccgagcccccaacccagcccgaggctgctgggggcggc
ggcggcggcggcggcggcggcagcagcagcgcgggaggctcctctgcgccgagccccgcc
ccggccatgtcgccggtgccgccgtccccctcgcccgtgcccacccccacctcgcccagc
ggcccggccaccctggatttcaccagccagttcggggcggccctggtcggggcggcccgg
agggaagggggctggcagaacgaagcccgccggcggtccacgctcttcctctccaccgac
gcgggggacgaggatggcggcgacagcgggctgggcccaggggcgcccccgggtccccga
ctgcgccactcgaagtccatcgatgaaggcatgttttccgccgagccctatctgcggctg
gagtctgcgggcgcggggagtggcggtggctacggggcttacgcggccggcagccgcgcc
tacgggggcagtgggggcagcagcgccttcaccagcttcctgccgccccggcccctggtc
cacccgctgaccggcaaggccctggaccccgcctcccctctcggactggccctggccgcc
cgagagcgggcgctgaaggagtcctcggagggtggtgggcccccccagccccctccaagg
cccccatcgccccgctatgaggccccgccgcccaccccacaccaccactcgccccacgcc
caccatgagccggtgctgcgtctctggggagcctcaccgccggaccccgcccgtcgggag
ctggggtaccgtgcagggctgggcagccaggagaagtcccttccggccagccctccagct
gcccgacgctccttgctgcaccgcttgccccctacagctcccggggtcgggcccctcctc
ctgcagctggggccagagcccccgcccccgctccccggggtgaacaaggcgtggaggtcg
ggagcccctgaggagccggagcggctgcccctgcacgtgcggttccttgagaactgccag
cccagagccagtggggcggggggaaggggacccccctcggaagacgggccgggggttcca
ccgcccagcccgcgccgctccgtaccgccctcgccgacctccccgcggggcactgaagag
aacgggcttcccctgctagtcttgccgccccctgctccctcggtggatgtggaagatggc
gaattcctctttgtggaaccgctgcctccgcctctggagttctccaacagcttcgagaag
ccagagtcgcccctcacacccgggcccccccatccgctgccggacccacccaccccaacc
accccattgcccccagtgccaccacctgctgtcgccgctgcacctcccaccctggactcc
acggcatccagcctgacttcctatgacagtgaggtggccacactgacccagggggccccc
gtggctcctggggacccccctccgccaggcccaccggccccggctgcccctgctcccccg
gcgccacagcctggtccggacccaccgcccggcacagattcgggaatcgaggaggtagac
agtcggagcagcagcgaccacccgctggagaccatcagcagcgcgtccacactgagcagc
ctttctgcggaaggcggtggccctgcaggaggcggtggtggaggcggtggggccagtgtg
gccagtgggccagagcttctggacacatacgtggcctacctggacggccaggccttcggg
gggagtgggactcctggcccaccctatcccccacagctcatgactccttctaagctccgg
ggccgggctctggggaccagtggaggcctgaggcctggccccagtgggggactccgggac
cctgtcactcccaccagccccactgtctctgtgacgggagctggaacagacgggctgctg
gccctgagtggttgcacgggaccctcgacggcgggtatggctgggggtccggtggcgata
gagccggaaggcccaccagtgcccttgccatcagcctcctctttgcctcggaagctgcta
ccctgggaggagggcccgggcccaccgccaccacccctgcccgggcccctggcccagcct
caggcctcagccttggccacagtaaaagccagcatcatcagtgaactcagctccaagctt
caacaatttgggggctcctcggcagctggtggcgctctgccctgggcccggggaggcagc
gggggaagcggggacagtcaccacgggggatccagctacgtccctgagaggacctcttcc
ctgcagcggcagagactctctgaagactcccagtcctcgctcctctccaaacccgtcagc
agcctgtttcagaactggcccaaaccacctctgccgccactccccacaggaagcggggtc
cccccttcagctgctgcagcgtcgggggccacctcaccctcagcctcctcctccacgtcc
acccgccacctccagggcgtggagttcgagatgcggcctcctctgctccgccgggccccc
agcccctcactgctgcccgcctcggagcacaaggtcagccctgcgcccaggccctcgtcc
ctgcccatcctgccttccggacccctgtatccgggcctctttgacatccgcagctcccca
accggaggggcaggaggttcagctgatcctttcgcccctgtctttgtgccaccacaccct
gggatgtctggggggcttggcggggccttgtcaggggcctcccgctccctctcaccaacc
cgcctgctttcgctgcccccggacaagcccttcggcgctaagcctctggggttctggacc
aagttcgatgtggctgattggctcgagtggctggggttggctgagcaccgggcacagttc
ctggaccacgagatcgatggctcccatctgcctgccttgaccaaggaggattacgtcgat
ctgggtgtgaccagggtgggccaccgcatgaacatcgaccgggctctcaaatttttcctg
gagaggtga
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