Mustela nigripes (black-footed ferret): 132005385
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Entry
132005385 CDS
T09425
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04514
Cell adhesion molecule (CAM) interaction
mnp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132005385 (LRRC4B)
04517 IgSF CAM signaling
132005385 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132005385 (LRRC4B)
Cell adhesion molecules [BR:
mnp04515
]
Immunoglobulin superfamily
NGL family
132005385 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
132005385
NCBI-ProteinID:
XP_059238434
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All DBs
Position
17:4513765..4551453
Genome browser
AA seq
714 aa
AA seq
DB search
MACARSSLCLPLLPGRMSWPHGALLFLWLFSPPLGAGGGGVAMTLAAGGGSPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGVGPGGPGGGGGGG
GSGGYTYFTTVTVETLETQPGEETLQPRGTEKEPPGPTTDGVWGGGRPGDAAGPASSSTT
APAPRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKL
RKQHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPALERDH
LNHHHYVAAAFKAHYSGNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgcccgcagctccctgtgcctcccactgctgcccggtaggatgtcctggccc
catggggccctgctcttcctctggctcttctccccacccctgggggccggcgggggcggc
gtggccatgacattggcggccggagggggctccccaccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacacggagagagctggctgaggtc
ccggccagcatccctgtcaacacgcggtacctgaacctgcaggagaatggcatccaggtg
atccgcaccgacacgttcaagcacctgaggcacctggagatcctgcagctgagcaagaac
ctggtgcgcaagatcgaggtgggcgccttcaacgggctgcccagcctcaacacgctggag
ctgttcgacaaccggctcacgacggtgcccacgcaggccttcgagtacctgtccaagctg
cgggagctctggctgcgcaacaaccccatcgagagcatcccttcctacgccttcaaccgt
gtgccgtccctgcggcgcctggacctgggcgaactcaagcggctggagtacatctcggag
gcggcctttgagggcctggtcaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaatctgacggccctggtgcgcctggaggagctggagctgtcgggtaaccgg
ttggacctgatccgcccgggctccttccagggcctcaccagcctgcgcaagctgtggctc
atgcacgcccaggtggccactatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacacccctg
caccgcctggagcgcgtccacctcaaccataacccctggcattgcaactgcgacgtactc
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcccgctgc
cacgcacccgccggcctcaaaggccgctatatcggcgagctggaccagtcgcacttcacc
tgctacgcgccggtcatcgtggagccgcccacggacctgaacgtcaccgagggcatggca
gccgagctcaagtgccgcacaggcacctccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaacgtcaccgtgcaggacacgggccagtacacgtgcatggtgacgaac
tcggccggcaacaccaccgcctccgccacgctcaacgtctcggctgtggaccccgtggcg
gccggcggtgctggcggtggggtcggcccgggcggcccgggcggcggcggcggcgggggc
ggcagcggcggctacacctacttcaccaccgtgaccgtggagaccctggagacgcagccg
ggagaggagaccctgcagccgcgggggacggagaaggagccgccggggcccacgacggac
ggtgtctggggcgggggccggcccggggacgctgccggccctgcctcgtcatccaccacg
gcgccagccccgcgctcctcgcggcccacggagaaggcgttcacggtgcccatcacggac
gtgacggagaacgccctcaaggacctggacgacgtcatgaagaccaccaagattatcatc
ggctgctttgtggccatcacgttcatggccgccgtgatgctcgtggccttctacaagctg
cgcaagcagcaccagctccacaagcaccacgggcccacgcgcaccgtggagatcatcaac
gtggaggacgagctgcctgccgcctcggccgtgtccgtggccgccgccgccgccgtggcc
ggcggtgggggcgtcggcggggacagccacctggccctgcccgccctggagcgagaccac
ctcaaccaccaccactacgtggcggccgccttcaaggcgcactacagcggcaaccccagc
ggcgggggctgcggtggcaagggccccccagggctcaactccatccacgaacctctgctc
ttcaagagtggctccaaggagaacgtgcaagagacgcagatctga
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