Mustela nigripes (black-footed ferret): 132005449
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Entry
132005449 CDS
T09425
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132005449 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132005449 (CNOT1)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132005449 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132005449 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
132005449
NCBI-ProteinID:
XP_059238583
LinkDB
All DBs
Position
17:complement(34197119..34310205)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLGGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaatcggcacggt
ccagaggcagacaggcatttattacgctgcctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatttcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagcttcctgatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacatctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacaaatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctccttggctgattttatgcag
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttggggatgatggctcgaact
cattcaggattgacagatggaattccattacagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagcggggtctaggtatggaagtgttcccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgc
tttgctgactatccctgtcatacggttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctt
gcagaggtggggcaatatgagcaagtcaaacagctcttcagcttccctattaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcttggcacaccttgcgccat
gagctcatttctactctgatgccaattttcctcggaaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaatccgccaacttattatgcac
gcgatggcagaatggtacatgcgaggggagcagtatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgataagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgtatgactttttta
aagagacggtgcccttctattttgggtggacttgctccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcgacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaaccatccttaccatggtggccaattgcagtaatgtt
atgaacaaggccagacagcctccacctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcccgttcagattgaccctcttggtggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgccttcagtacccctcaatcaccagcaaaagcatttccacccctttcaacccca
aatcagacaactgctttcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacctgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagaaatagatgacgaagcgaacagctattttcagagaatatataatcacccacca
catccaactatgtctgttgatgaggtattagaaatgttacagaggtttaaagattctacc
ataaagagggaacgagaagtctttaactgtatgctgaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagagttacatataacagcctgcctgttcggtgggata
attgaaaaaggactggtcacttacatggcactaggtctggccctgcgatatgttcttgaa
gccttacgcaagccttttggttctaaaatgtattattttgggattgctgcactagatagg
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgaatatggacaacagtctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctccccttgctggtcaggttagcacgatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagacacgttgcttgtg
gccacagatcaaactgaaagaattgtagagcccccagaaaatatccaagagaaaattgct
tttatcttcaataatctctcacaatcgaatatgacccaaaaggttgaagaactaaaggaa
actgtgaaggaagaatttatgccttgggtttcacagtacctggttatgaagagagtcagt
attgagccaaactttcacagcctctattcaaacttccttgacacgctgaagaaccctgaa
tttaataagatggttctgaatgagacctacagaaacatcaaagtgctcctgacctctgat
aaagctgcagcgaacttttcagatcgttctttgctgaagaatttgggacattggctagga
atgataacactagctaaaaataaacccatcttacacactgacttggatgtaaagtctttg
ctgcttgaggcttatgttaaaggacagcaagagctgctctacgtagttccctttgttgcc
aaagtcttagaatcaagcattcgtagtgtggtttttagaccacccaacccgtggacaatg
gcaattatgaatgtgttagcagagctacatcaagaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgtaagaaccttgcactagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcacaaccacaacaacttctacaaca
ccagctaccagtactacttgtacagccacggttccaccacaaccacagtacagctaccac
gacatcaatgtctattcccttgcaggcctggcaccacacattaccctaaatccaacgatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgccaggcaattgaacgggct
gttcaggagctggtccatcctgtggtggatcgatcgattaagattgctatgactacttgt
gagcaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaatttaacagctggaatggctatgattacctgcagggaacct
ctgctaatgagcatatctaccaacctgaaaaacagctttgcatcagcccttcgtaccgca
tccccacaacagagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggat
aagagattagcaactgaatttgaactgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcaggctaaaa
gttggtggtgtggacccaaagcagctggctgtttacgaagagtttgcacgcaatgtgcct
ggcttcctgcccacaaatgatttaagtcagcccacaggatttttagctcaacccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgcattacagaattggag
cagcacctacatgccatcccgccaactttggccatgaatcctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ctgctccagaaggctgtagagggtttactagatgctacaagtggtgctgatgctgacctg
ttgctgcgctacagggagtgccaccttttggtcttaaaagctcttcaagatggccgggca
tacgggtctccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatacaatgtggaagcagtggagttgctcattcgtaatcatctggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgtggca
tttgctatgcaattggtaaaaatcctgttggtggatgaaaggagtgttgctcatgttact
gaggcagatctattccacaccattgaaactctcatgaggattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattcgggaatctctcaagcctca
gagtatgatgatcctccaggcctgagggagaaggcagagtatctcctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccaacaaggaatcctgaagactgatgac
cttataacgaggttctttcgactgtgtactgaaatgtgtgttgaaatcagttaccgtgct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgtccgactcattgctctgctagtaaagcactcaggggaggcc
accaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctgcaggaccatgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatt
tttatcatgttgctcttggaactcaatgcacctgagcatgtattggaaactattaatttc
cagacacttacagctttctgcaatacattccatatcttgaggcctaccaaagctcctggc
tttgtgtacgcctggcttgaactgatctctcatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcgcagctactgattgatttattcaaa
tatttagcgcctttccttagaaatgtggaactcaccaaacctatgcaaatcctctataag
ggtactttgagagtgcttctggttcttttgcatgatttccctgagttcctttgtgattac
cattatggattctgtgatgtgatcccacctaattgtattcagctaagaaatctcatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgagattaacattgcaccccggattcttaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcgatcaccggtcacttttctg
tctgatttgcgaagcaacctacaggtatccaatgagcctggcaatcgttataacctccag
ctcataaatgcactggtgctctacgtagggactcaggccattgcacacatccacaacaag
ggtagtacgccatcaatgagcacgatcacccactcggctcacatggacatcttccagaac
ctagctgtggacttggacactgaaggtcggtatctcttcctgaatgccattgcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgtaccatgctgtacctttttgca
gaagccaacactgaagctatccaagaacagattacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattaccttcattgagctgattaaaaatcca
gcgtttaagttctggaaccacgagtttgtacactgtgccccagaaattgaaaagttattc
cagtcggttgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
