Mustela nigripes (black-footed ferret): 132005471
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Entry
132005471 CDS
T09425
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03030
DNA replication
mnp03410
Base excision repair
mnp03420
Nucleotide excision repair
mnp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132005471 (RFC1)
03410 Base excision repair
132005471 (RFC1)
03420 Nucleotide excision repair
132005471 (RFC1)
03430 Mismatch repair
132005471 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnp03032
]
132005471 (RFC1)
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132005471 (RFC1)
DNA replication proteins [BR:
mnp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132005471 (RFC1)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132005471 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
RuvB_N
AAA_30
AAA_17
AAA_14
AAA_5
AAA_33
AAA_16
Zeta_toxin
nSTAND3
AAA_7
SKI
AAA_18
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
Abhydrolase_8
TIP49
Motif
Other DBs
NCBI-GeneID:
132005471
NCBI-ProteinID:
XP_059238629
LinkDB
All DBs
Position
1:complement(234996238..235074447)
Genome browser
AA seq
1155 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETVKKNEKTRSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGRSTNSYLGASHMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSEKK
MVASKRKEPSQNADDSRLNDEAIAKQMQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDPGEREAFSSVQANLSKAEKHKSPYKVKTEQFSDDRKNCSPKKQSKCESLIGSQQHL
KSSPHKIGETSPKASSKVALLKKRGESSYKETEPMASKRKENAVELKGQTKTPKKPKSSP
AKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKKSRLTPKKDSTTK
SPKKGTGVFWRCLDFEEQVAEETDGDSQARNLADDSSEKNKVEHLLWVDKYKPTSLKTII
GQQGDQSCANKLLRWLQNWHRSPSEDTKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTT
TASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYSTSQHGSGGPTHSIST
KHALIMDEVDGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQ
RPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQA
KADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVK
PVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYM
TQFPTFPSWLGRHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHIRDALVQPLTSQ
GVEGVQDVIALMDAYYLMKEDFENIMEISNWGGKPSPFSKLDPKVKAAFTRTYNKEVHLI
PYSLQAVKTPRHSTGPALDSEYNEELNEDDSQSDEKDQDSMETDAMIKKKTKSSKPSKSE
KDKESRKGKGKSSKK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgtaactgaaaca
gtaaagaagaatgagaaaacaaggtctgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaagcagaagcaaccaaac
aagaaaaagaggatcatttatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaattgccattgtcttctaaacctggtaaaattctacgc
caggatcctgttacatacatttcagaaacagatgaagaagatgattttatgtgtaagaaa
gcagcctctaaatcgaaagagaatggaagatctacaaatagttatcttggagcatcacac
atgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgattattttggaactggaagtgtccaaagatcagagaagaag
atggtagcaagcaaaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccattgccaagcaaatgcaacttgatgaggatgcagagctggagagacagctgcat
gaagatgaagagtttgccagaacattagccatgttggacgaagaacccaagaccaaaaag
gctcggaaggacccaggagagagagaagcgttttcatctgtccaagccaatttaagtaaa
gcagaaaaacataaatctccttataaagtaaaaacagaacaattttcagatgacagaaag
aactgcagtcccaagaagcaatctaaatgtgaaagtttgataggatctcagcaacatttg
aagtcgtcccctcacaaaataggagaaacttctccaaaagccagttccaaggtggccctt
ttgaaaaaaaggggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaa
gaaaatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaaagttctcca
gctaaaaaagagtctgtaagtcctgaagattctgagaagagacgcactaattatcaagct
tatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataag
gcagcagctttggggacaaatattattgatgaagatggcctgttgaatctgattcgaact
atgccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaagaaagaaaag
tccaaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaact
aagaaggaatcagaatccaaaaaaagcagactgactcccaaaaaggacagcactacaaag
tcgccaaaaaagggaacaggtgtgttttggagatgcctggacttcgaggagcaggtggct
gaggagacagacggtgacagccaggctaggaatttggctgatgacagcagtgaaaaaaac
aaagtggaacatttgctctgggtggataaatacaagccaacctcgctcaagaccataatc
ggacagcaaggggaccagagctgcgccaacaaactcctccgctggctccagaactggcac
aggagtccgtccgaggatacgaaacgcgccgcaaagttcggtaaatttgctggcaaagat
gatggctctagttttaaagcagcgctgctctcaggccctccaggtgttggcaagacaacc
acagcttctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgac
actcggagtaagaacagtttgaaggagattgttgctgaatcactgaataataccagcatc
acaggcttttattcaacttctcagcacgggtcaggcgggccaacccattcaataagcacg
aaacatgctctcatcatggatgaagtcgatggcatggcaggcagtgaggacaggggagga
attcaggaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaat
gatagaaatcatcccaagattcgctctttggttcattattgttttgatcttcgttttcaa
agacctcgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttg
aagatcccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacag
gttttacacaatctgagtatgtggtgtgcacgaagtaaggccctaacctatgaccaggcc
aaggctgattctcatagagccaagaaggatatcagactgggcccatttgatgttgcccgg
aaagtgtttgcagctggagaggagaccgctcatatgtcacttatggacaagtcagatctc
ttctttcatgattattcgatagcacccctctttgtccaggagaactatgtacacgtgaag
cctgtggctgcagggggagacatgaaaaagcacttgatgcttttaagcagagcagcagac
agcatatgtgatggtgacctagtggaccgtcagatccggagtaaacagaactggagtctc
ctgcccacgcaggccatttatgccagtgttcttcctggagagttaatgagggggtacatg
acccagtttcctacctttccaagctggttggggcggcactcatctaccggcaaacacgat
cgtattgtgcaggacctagcactgcacatgagtctcagaacttactccagcaaaaggact
ataaacatggattacctgtcccatataagggatgcacttgtacagcccttgacctcacaa
ggggtagaaggagtacaggatgtcattgctcttatggacgcctactacttgatgaaagaa
gactttgagaatatcatggaaattagcaactggggaggcaaacctagtcccttctccaag
ctggatcccaaggtgaaagcagccttcacgagaacttacaataaggaagtccacctcatt
ccatattcccttcaggctgtaaagacacccagacacagtacaggccccgcgctggattct
gaatacaatgaagagttaaatgaagatgactctcaatctgatgagaaagaccaagactct
atggaaactgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaa
aaagataaggagtccagaaaaggaaaaggaaaaagttcaaagaaatga
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integrated database retrieval system
