Mustela nigripes (black-footed ferret): 132005576
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Entry
132005576 CDS
T09425
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
132005576 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132005576 (CIC)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132005576 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
132005576
NCBI-ProteinID:
XP_059238822
LinkDB
All DBs
Position
17:10082042..10109376
Genome browser
AA seq
2524 aa
AA seq
DB search
MKPMKKACVGLPGSGSGGKSPPATRAKALRRRGAGEGEKPEEEDEEVQQQQPQQPPGPEE
VEEGEEEESERGSGAEGLTPEPHPDDPAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRA
PKKKYVEEHGAGSGNGGPAGAPEERARTPEEAGALGVPPRPPTSTRSSSTDTASEHSADL
EDEPAEACGPGPWPPSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFP
GDRALTFYEGAPGSGVHVVLDATPPPAALAVGTAVCTCVEPGVAAYREGVVVEVATKPAA
YKVRLSPGPSSQPGPAAVPQPPQLPHHEPEEAVWVARSSLRLLRPPWEPEALPRKHPAGP
EEEQAEAGGALAPCPAALDPKQPEDAEVSKISFGGNLGTCEEGEEKHPPALGTPALLPLP
PPQLLSPPPKSPAFVGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAA
QQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLAD
SGPAGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDEC
EAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTA
VRSRHLSASTPKGGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTE
LLPHPGALGAPGAGGGGATPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSR
QPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVSTAGEARVA
GPGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVA
FHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQ
PDPSVQPSEAQQPASHPVASTQSKEPAESAAVAHEQPPGGTGSADPGRPPGATCPESPGP
GPPHTLGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGK
RRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNR
TVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPASLGL
AGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGTERLHTVGGPG
SARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFSASGEGG
ALAAGGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGATDIDLKCK
ERVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPSPPAFGKG
YGPTPSSSSSSPASSSVSAATSFPLGSGTFKAQESGQGSTAGPLRPPPPGAGGPGTPSKA
TRFLPSDPAAFRRKRPESVGGLEPPGPSVIAAPPGGGGSVLQTLVLPPNKEEREGSGTRM
PSAPAPSLAYGAPTAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRVEASPNDTVGA
RTEPVTGSRAPGSSPLGVSLVYSDKKSAAASSPAPHLVAGPLLGTVGKAPATVTNLLVGT
PGYGAPAPPAVQFIAQGAPGSGATTGSGAGAGSGPNGPVPLGILQPGTLGKAGGITQVQY
ILPTLPQQLQVAPAPAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIP
ILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSP
PFSVPLQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRITYV
QSAGGHALPLGTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPG
QVGVSPVPSPQLPPACTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTPP
AATILPKGPPAPATATPAPTSPFPNASAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPV
GSFEAGAPGRSGPAARQPLEPGPAREPPPTESELEGQPTTPAPPPPPETWAPMARSSPPP
PPPAEERTSSKGPETVASKFPSSSSSDWRVPGLGLETRGEPPTPPSPAPAPASAPGGSGS
SSSEGSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPE
FRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEP
NTPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFF
PSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEASLPGPPPTGTA
AAPVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSTA
ATGR
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgtgtcggcctcccaggttctggcagtggcggcaagtcc
ccaccggccacccgggccaaggccctgagacggcgaggggctggggagggcgaaaagcca
gaggaggaagatgaagaggtacagcagcagcagccccagcagcctccggggccagaagag
gttgaggagggtgaggaggaggagtccgagcggggctctggggctgaggggctgaccccg
gagccacaccccgatgacccggcggccccaggccctgctgaggaccctaaggtagagggg
gaggcaagtcgctgggaaccctccctcagccgtaagacggccacattcaagtctcgagcg
cccaagaagaagtatgtggaggagcatggagccggcagtggtaacggtgggccggccggg
gcccctgaggagcgggcacgaacccctgaggaggccggcgccctgggggtccctccacgg
ccacccacctccacccgttcctcttccaccgacacagccagcgagcactcagctgacctg
gaggatgagcccgccgaagcctgtgggccaggcccctggcccccaagtggcaccagtggc
ggatacgacctgcggcagctgaggtcccagcgggtgctggctcggcgtggagacggcctc
ttcttgccggccgtggtgcgccaggtgcgccgaagccaggacctgggcgtgcagttccct
ggggaccgggcactgacattctatgagggggcgcctggcagtggtgttcatgtggttttg
gatgctacgccgccgccagctgcccttgcggtgggcacagctgtttgtacctgcgtagag
cctggcgtggctgcctaccgtgagggtgtggtggtggaggtggccaccaagcctgctgcc
tacaaggtccgcctcagtcctggccccagctcccagcctggtccggccgctgtcccacag
cccccacagctgccacaccatgaacctgaggaggccgtgtgggtggcccgttccagcttg
cgcctgctgcggcccccctgggagcctgaggccctgccaaggaagcaccccgcaggccct
gaggaggagcaggctgaggcagggggtgccctggccccctgccctgctgccctggacccc
aagcagcctgaggatgccgaggtgtctaagatcagctttggtggcaacctggggacttgc
gaggagggtgaggaaaagcacccgccggccctgggcaccccagccctgctcccgctgcct
ccgccccagctcctgtcaccgccaccaaagtccccagcttttgtgggcccgggccgccct
ggggagcagccatcaccctgccaggaggggagccagggcggcagccggagcagcagtgtg
gcctccctggagaagggggcagcgccagccgcccgagcacgcacaccactgacagccgca
cagcagaagtataagaagggtgatgtggtctgcacacccaacgggatccgcaagaagttc
aatggcaagcagtggcgccggctgtgctcccgagatggctgcatgaaggagtcgcagcgg
cggggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggcctggcggac
agtggcccagctggggctgggcggccagcaggcgtggcggcacgggagggcagcaccgag
tttgactggggtgacgaaacatcgcgggacagcgaggccagcagcgtggcagcccgcggg
gactcgcgcccacgcctggtggctcctgctgacctgtcccgctttgagtttgatgagtgt
gaggcggccgtgatgctggtgtcgctgggcagctctcgctctggcacaccctccttctct
cctgtgtctacgcagtcacccttctcacctgccccatcgccctccccgtcgccgctcttt
ggcttccgcccagccaacttcagccccatcaacgcctcaccagtcatccagcgcactgcc
gtccgcagccgccacctgagcgccagcaccccgaagggaggcgtgctgaccccaccagac
ctgggtccccacccgccgccacctgcccccagagagcgccattcttctggcatcctaccc
accttccagaccaacctgaccttcaccgtgcccatcagtcccgggcggaggaagacagag
ctgctcccccatccgggggctctgggggcccctggcgcagggggtggaggagccaccccg
gatttccccaagagtgacagcctagactctggtgtggactcggtgtcccacacacctaca
ccctccacgccggctggcttccgggccgtgtcgcctgccgtgcccttctcccgttcccgc
cagccctcgccgttgctgctgttgcccccacctgctggcctgacctcggatcccgggccc
tctgtgcgcagggttcctgctgtgcagcgggactcccccgtcattgttcgcaaccctgat
gtgccgttgccctccaaattccctggggaggtgagcactgctggcgaggcgcgggtagca
ggacctgggcggggctgccgagagaccccagtgccccctggggtggccagtgggaagcct
ggcctgcccccacctctgccagcccctgtgcccatcaccgtgcctccagccgcgccgact
gctgtggcccagccgatgcccaccttcggcctggcttcttcacccttccagccggtggcc
ttccacccctcacctgctgccctattgcctgtcctggtccctagcagctacaccagccat
cctgcccccaaaaaggaagtcatcatgggccgacctgggacagtgtggacaaatgtggaa
cctcgctctgttgccgtgttcccctggcactccttagtcccttttctggcccccagccag
cccgacccctctgtacagccaagtgaggcccagcaacctgccagccacccagtggcctcc
acccagagcaaagaacctgctgagtcggcggctgtggctcatgagcagccaccaggtggg
acagggagtgctgaccctgggcggccccctggagccacctgccctgagagcccagggccc
ggacccccccacactttgggggtggtggaacctggaaagggtccccctcccaccactgag
gaggaggcccctggccctccaggagagccccggctggacagcgagacggagagtgaccat
gatgatgccttcctctccatcatgtctcccgagatccagttgcccctgccacccgggaaa
cgccggacccagtccctcagtgccctgccaaaggaacgagactcctcttcggagaaggat
ggacgcagccccaacaagcgggagaaggaccatattcggcggcccatgaacgccttcatg
atcttcagcaagcggcaccgggccctggtccaccagcgtcaccccaaccaggacaaccgg
accgtcagcaagattctgggcgagtggtggtacgccctggggcccaaggagaagcagaag
taccatgacctggccttccaggtgaaagaggcccactttaaggctcacccagactggaag
tggtgcaacaaggaccggaagaagtccagctcagaggccaagcctgcgagcctggggcta
gcaggaggacacaaggagactcgggagcggagcatgtcggagacggggactgccgcggcc
cctggagtgtcctcggagctcctctccgtcgcagcccagacactcctgagctcggatacc
aaggctccagggagtggttcctgtgggacagagcgtctgcacacagtggggggacctggc
tcggcccggccccgagccttctcccacagtggggtccacagcctggatggtggggaagta
gatagccaggcactacaggaactgactcagatggtatccggccctgcatcctattctggt
ccaaagccttccacccagtatggggctccaggccccttctcagcctctggtgagggaggt
gccctggcggctggcgggcgacccccgctgctgcccacccgggcctcccgttcccagcgt
gcagccagtgaggacatgaccagtgacgaggaacgcatggtcatctgtgaggaggaggga
gacgatgatgtcattgctgatgatggcttcggcgccactgacattgaccttaagtgcaag
gagcgggtgactgatagcgagagcggagacagctctggggaggacccagagggcagcaag
ggttttggccggaaggtgttctcgcctgtgattcgttcctccttcacccactgccgccca
ccgttggaccctgagcccccagggcccccggatccatcacctccagcctttggcaaaggc
tacgggcccaccccttcgtcgtcctcgtcctcacctgcctcctcctcagtctcagccgcc
acctccttcccactgggctcagggaccttcaaggcccaggagtcaggtcagggcagcacg
gcaggcccactacgacccccacctcctggggctgggggcccagggacaccttccaaggcc
acccggttcctcccatcggatcctgccgccttccggcgcaagagacctgaaagtgtggga
ggcctggagccaccaggcccctcagtcattgcagcacctcccggcgggggaggaagtgtc
ctgcagacgctggtcctgcccccaaataaggaggaacgggaaggcagcggaacccgcatg
ccctcggccccagccccgtcactggcctatggggccccaacagcccccctgtcccgccca
gctgctaccatggtcaccaatgtggtgcggcccgtcagtagcactcctgtgcccatcgcc
tctaagcccttccctacctctggccgggttgaggcatctccaaatgacactgtgggtgcc
aggactgagccggtcacggggtcccgggcgccagggagctccccgctgggtgtaagctta
gtgtactcggacaagaagtcggcagcagcctcctcgccggccccgcacctggtggctggg
cccctcctcggtactgtgggaaaggcccctgccacagtcaccaacctgctggtgggcaca
ccgggttatggtgccccagcgccccctgctgttcagttcatagcccagggggcccctggc
agtggagccaccacaggctctggagcaggcgctgggagtggccccaatgggccagtgccc
ctgggcatcttgcagccgggcaccttgggcaaggctgggggaatcacccaggtgcagtac
atcctacccacgctgccccagcagcttcaggtggcgcctgccccggcaccagcccctggg
accaaggcagcagctcctggcggccccgcaccaaccaccagcatccgtttcaccctcccc
ccgggcacctccaccaacggcaaagttctggcggccaccgcacccacccctggcattccc
atcctgcagtccgtaccctctgccccaccccccaaagcccagtcggtgtctcctgtacag
gctccgcccccgggtggctcagctcagctgctgcctgggaaggtactggtgcccctggcg
gcccctagcatgtccgtgcggggtggaggggctggccagccactgcccctggtgagcccg
cctttctcagtacctttgcagaatggggcccagccacccagcaagatcattcagctgact
ccggtgcctgtcagcacacccagtggcctggtgccgcccctcagcccagccacactctcc
ggacccacctcccagcctcagaaggtcctgctgccctcctctaccagaatcacctacgtg
cagtcagcgggtgggcacgccttgcccttgggcaccagccctacgtccagccaggctgga
acagtcacctcgtatgggcccacgagctcggtagccctaggcttcacctcgctggggccc
agtggacctgcctttgtgcagcccctgctttcaggccaagctccattgctggctcctggc
caggtgggcgtgtcgccagtgcccagcccccagctgccgccagcctgcacagcccccgga
ggtcccgtcatcactgcattttaccctggcagccctgcacccacctcctctgcaccccta
gcccagccatcccaggctcctccaggtctggtctacaccgtggccactagcaccccacct
gctgccaccatcctgccgaagggcccaccagcccctgctactgccaccccagcccctacc
agccctttccctaatgcttcagcaggctccatgacctacagcttagtggcccccaaggcc
cagcggcccacccccaaggccccccagaaagtgaaggctgccattgccagcattcccgtg
ggttcctttgaggcaggtgcccctgggcggtcaggccctgcagctcggcagcccttggag
cctggcccagcccgggagccccctcccactgagtctgagcttgaggggcagcctacgaca
ccggcccctccaccacccccagagacctgggctcccatggcccggagcagccccccgcct
cccccgcctgctgaggagcggacaagcagcaagggccctgagactgtggccagcaaattc
cccagctcttcgtcttcagactggcgagtccctgggctgggtctggagacccgtggggag
cctcccacccctcccagcccagcgccagctccggcttcagcccctggcggcagtggcagc
agcagcagcgagggcagcagtgggagggcagccggggacacccctgagcgcaaggaggcc
gctggtaccggcaagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactct
gtggacaacagggtcctgtcagaggtggacttcgaagagcgctttgctgagctgcctgag
ttccggcctgaggaggtgctgccttcgcccaccctgcagtctctggccacctcgccccgg
gccatcctgggctcctaccgcaagaagaggaagaactccaccgacctggactcggccccc
gaagaccccacctcgccgaaacgcaagatgaggagacgctccagctgcagctcagagccc
aacacccccaagagtgccaagtgcgagggggacatctttaccttcgaccgtacaggtacg
gaagcggaggatgtgctcggggagctggaatatgagaaggtgccatactcttccctgcgg
cgtaccctggaccagcgccgggccctggtcatgcagctcttccaggaccatggcttcttc
ccatcagcccaggccacggcagctttccaggcccgctacgcagacatcttcccctccaag
gtgtgtctgcagttgaagatccgtgaggtgcgccagaagatcatgcaggcggccactccc
acggagcagccccctggagctgaggcctcccttcctggaccgccccccactggcactgct
gctgcccctgttcccactcccagccctgctgggggccctgaccccacctcacctggctcg
gactctggcacagctccagctgccccgccactgcctccacctccagagccgggtcccgga
cagcctggctgggagggtcccccccagccgtcccctccgccccccggcccctccacagct
gccacaggcaggtga
DBGET
integrated database retrieval system
