Mustela nigripes (black-footed ferret): 132005967
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Entry
132005967 CDS
T09425
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132005967 (TAF1C)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
132005967 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
132005967
NCBI-ProteinID:
XP_059239491
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Position
17:complement(55493983..55503699)
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AA seq
864 aa
AA seq
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MDFPSSLRPTLFMAGPLGLSNVPDLSFMCSWRDALMLPESPPDNSENGAPHMATQLLWEP
ETPGPLPLLPPGPDPWDPGVTAQDLLFRGGFTFRRKPRAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARSRSKKKTVVSVKSLLQDLGGHQPWGCPWAFLSYRQRRFSILGGP
VLGKSVASLLGELLHEELAVRWEQLLLDDAFTGGALAWVPGRTPQVGQLVYPAGGALDKL
CFQEVSLTSSGDAQALRDPGHIQLRGPVRQVVTRTVQGETLLAVRSDYHCALWKVSKQGQ
PAPLPVLQVGKGATGISLSPHLPGELAVCSRSGAVCLWTPQDGLQQVYKDPETLVFCDHS
SWRWADFTAHPRVLTVGDRTGVKIIDTQGPPGCGLLLFRGGAEASCQKGERVLLTQYLGT
CSPEPLLPTLHLICTQFSLYLVDERLPLVPMLKWNHELPSAPLWAQLLPPPRPGCPRPLL
LGAQRGHLRLLHLTGEGASAPRLAGHPQSLPSSSDSLSAFPLLEPKSQWRLQERLKAPTI
GLAATIPFPASEPVLSLFQLSAAGDIFHQRLRLQADPGATLHAPTASWTPQATACCSRWL
KALLKVPPPPPVWAAPTFSHRRLLGCMEQRTGERKGPEGLRAAMAGGRLLQQRDLGPLPS
AEPPPAPEPGPEDELSARLEAAWEGQMAAWWERQQGRSSGPSRLPKRHKRRTQLSSTFSS
LSGRLGLSDATSPPHSPDRASPEAKLQPPVTPPSHESTQELWAQGVPSERQQTLRDYMAK
LPLGGDSPRGVCSSLSQSPSLQATPSSSQTLQERTAELPPRRTTLRGAAVSSSQTSSLRA
TPSRQRAPVPSGSQPQRKKPRMGF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctcccttcgacccacactgttcatggctggcccccttggtctgagt
aatgtccctgacttgtccttcatgtgtagctggagagacgccctgatgctgccggagtcc
ccgcccgacaactctgagaatggggcgccgcacatggccacgcagctgctctgggagcca
gagacccccgggccccttcctctgctgcctcctggtcctgatccctgggaccctggggtg
actgcccaggacctgcttttccggggaggtttcacattccgaaggaagccccgagccgtg
ctggacgttacggaacagctcagccgcttcctgtgggaccatggggacatagcctttgca
cccctggggaagctgatgctggagaatttcaaactggagggagcacggagccgttctaag
aagaagacagtggtcagtgtgaagagcctactccaggacctcggtggacaccagccctgg
ggctgcccctgggctttcctcagctaccgacagcgccgcttctccatcctcgggggcccc
gtcctgggcaagtcagtggccagcctcctgggggagctgctgcacgaggagctggccgtg
cggtgggagcagctgctcctggacgacgcgttcaccgggggtgctttggcctgggtgccc
gggaggacgccccaggtgggacagttggtctaccctgcaggaggtgctctagacaagctc
tgtttccaagaggtcagtctgacctcaagcggtgatgctcaggctctcagggaccctggc
cacatccagctccgaggacctgtccggcaggtggtgacccgcactgtgcaaggggaaacc
ctgctggctgtccgctctgactaccactgcgccctgtggaaggtcagtaagcaggggcag
cctgcccctctcccggtgctgcaggtcgggaagggggccactgggatcagcctcagcccg
cacctgcccggggagctggctgtctgcagccgttccggagctgtctgtctgtggaccccc
caggacgggctgcagcaagtctacaaggaccctgagacccttgtgttctgtgaccattct
tcctggcgctgggcagacttcaccgctcatccccgggtgctgactgtaggggaccgcaca
ggagtgaaaattattgacactcagggcccacccggctgtggtctgctgctttttcgtggg
ggcgcagaggcatcatgccagaaaggagaacgtgtcctgctgacccagtatctggggacg
tgcagccccgagcccctgcttcccactctccatctcatctgtacgcagttttctctctac
ctggtggacgagcgcctccccttggtgcccatgctgaagtggaaccatgagctcccctca
gctcccctgtgggcccagctgctgcccccgccacggcccggctgcccccggccgctgctc
ctgggcgcccagcgcgggcacctgcggctgctacaccttacaggagagggggcctctgca
cccaggctggcggggcacccccagtctctcccttccagcagcgactccctctccgcgttt
cccctgctggagcccaagagtcagtggcggctgcaggagcgtctgaaagcgccaaccata
ggtctggctgccaccatccctttcccggcttccgagccagtcctgtcgctcttccaactg
tcagcagccggggatatcttccaccagcgcctccgcctccaggcagaccctggggctacc
ctccatgcccccacggcttcctggactccacaggccactgcgtgctgcagccgatggctg
aaggccctgctgaaagtgcccccgcctccccctgtgtgggctgcacccaccttttcccac
cgccgtctgctgggctgcatggagcagaggacaggggagcgcaaggggccagagggtctc
cgagcggccatggctggagggcggctgctgcagcagagggacctgggcccactcccctct
gcggagccaccccctgcccccgagccgggccccgaggacgagctcagtgcacgtttggag
gcggcttgggaaggccagatggccgcctggtgggagaggcagcagggccggagctccggg
cccagcagactgcccaagcggcacaagcgccggactcaactgtccagcactttctcctcg
ctcagtggccgcctgggtctctcggatgccaccagcccccctcatagcccagaccgggca
tcccccgaagccaagctgcaaccaccggtgaccccgccctcccatgagtccactcaggag
ctatgggctcagggtgtcccctcagagcggcagcagactctccgcgactacatggcgaag
ctgccgctcggaggggacagcccacgtggtgtctgctcgtccctctcccagagccccagc
ctccaggccacaccctccagctcccagaccctccaggaacgcacagccgagctgccacca
cgaaggaccaccctgagaggtgccgccgtgtcttcttcccagacctccagcctccgggcc
accccctccaggcagcgggcacctgtcccctctggctctcagccccagcggaagaagccg
cgcatgggcttctga
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