Mustela nigripes (black-footed ferret): 132006102
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Entry
132006102 CDS
T09425
Symbol
DDX19A
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03013
Nucleocytoplasmic transport
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132006102 (DDX19A)
03015 mRNA surveillance pathway
132006102 (DDX19A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132006102 (DDX19A)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132006102 (DDX19A)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132006102 (DDX19A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
WHD_Fungal_DR
Motif
Other DBs
NCBI-GeneID:
132006102
NCBI-ProteinID:
XP_059239763
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All DBs
Position
17:complement(47399820..47421120)
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AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSNLQIKEEKVKPDTNGVIKTNATAEKTEEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAEKYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCAKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcagtggacgagcaggaagcggctgtcaagtcgatg
agtaatttgcaaatcaaggaagaaaaagtcaaaccagataccaatggtgttattaaaacc
aatgccactgcagagaaaacagaagaagaagagaaagaggacagagctgcccagtcctta
ctcaacaagctgatccgaagcaacctggtggataacacaaaccaggtggaagtcctgcag
cgggacccgaactccccgctctactccgtgaagtcctttgaggagcttcggctgaaacca
cagcttctccagggagtctatgccatgggcttcaatcgaccatccaagatacaagagaac
gcattacccatgatgcttgctgagcccccccaaaacctgattgcccagtctcagtcaggt
actggtaaaacggctgccttcgtcctggccatgctcagccgagtggaaccagcagagaaa
tacccccagtgtctgtgcctctccccaacatatgagctggcgcttcaaacgggaaaagtg
attgagcagatgggcaaatttcatccagaactaaagcttgcttatgctgttcgaggcaat
aaattggaacgaggtcagaagatcagtgagcacattgtcatcggcacccctgggactgtt
ctggactggtgcgccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgctgcttttctctgccaccttcgaagactctgtc
tggaagtttgcccagaaagtggtcccagacccaaacattatcaagttgaagcgcgaggag
gagacactggacaccatcaagcagtattatgtgctgtgcaataacagagatgagaagttc
caggccttgtgtaacctgtatggggccatcaccatcgctcaggccatgatcttctgccat
acccgcaagacagcgagctggctggcagcagagctctccaaagaaggccaccaggtggcg
ctgctgagtggcgagatgatggtggagcagagggctgcggtgatcgagcgcttcagagag
ggcaaagagaaggtgctggtgaccaccaacgtgtgtgcccgcggtattgatgttgaacag
gtttctgttgtcatcaactttgacctccccgtggacaaggacgggaacccggacaacgag
acctacctgcaccggatcgggcgcacgggccgctttggcaagaggggcctggcagtgaac
atggttgatagcaagcacagcatgaacatcctcaacagaatccaggagcattttaataag
aaaatagaaagactggacacagatgatttggacgagattgagaaaatagccaactga
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