Mustela nigripes (black-footed ferret): 132006103
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Entry
132006103 CDS
T09425
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132006103 (SAMD4B)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132006103 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
132006103
NCBI-ProteinID:
XP_059239764
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All DBs
Position
17:complement(14491114..14529720)
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AA seq
695 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPTYHSRQGSDEWGSPAE
LGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANAGLPCQIHPSPLKRSMSLI
PTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAAAAATPTAKDGSRGEPP
LPGAEPSLVHPGTDKGTEAKDPPAAESYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVM
GKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAA
LEMQSYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGI
SPRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDC
PVPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctcgctggttggttcaagggctggaatgagtgt
gagcaaacggtggccctgctgtcacttctgaagcgggtcactcgcacccaggcccgcttc
ctgcagctctgcctggagcactcgctagcggactgcaatgacatccacctgctggagtcg
gaggccaacagtgctgccatcgtcagccagtggcagcaggagtccaaagagaaggtggta
tccctcctgctgtcccacctgcccctacttcagccaggcaacacggaggccaagtcggag
tacatgaggctgctgcagaaagtgctggcctactcgatcgagagcaatgccttcatcgag
gagagccgccagctgctctcttatgccctcatccacccggccaccacactggaggaccgc
aatgcactggccctctggctgagccacctggaagaacggctggctagtggcttccgcacc
cggcctgagcctacctaccactcacgccaaggctcggatgagtgggggagccctgcagag
ctgggccctggggaggcagggccaggctggcaggacaagccaccccgggaaaatggacac
gtgcccttccacccatccagctcagtgccgccagccatcaacagtattgggagcaacgca
aatgcaggtctcccctgccaaattcaccccagcccgctgaagcgctccatgtcgctcatc
cccacgagcccccaggcccctggtgagtggccgagtccggaggagcttggggcccgggct
gctttcaccacgcccgaccacgcacccctctcaccccagagcagcgtggcctcctctggc
agtgagcagacggaggagcagggctccagccggaacactttccaggaggacggcagtggc
atgaaagatgtgccctcatggctgaaaagcctccgcttgcacaagtatgcggccctcttc
tcacagatgagctatgaggagatgatgacactgactgagcagcatctggaatctcagaat
gtgaccaaaggtgcccgccataagatagcgctgagcatccagaagctgcgtgagaggcag
agtgtcctcaagtccctggagaaggatgtgctggaaggcgggaatctgcgcaacgctctg
caggagctacagcagataatcatcacccccatcaaggcctacagcgtcctccaggccact
gtggctgctgccgctgccgccacccctactgccaaggatgggagccggggagagcctcca
ctgccaggtgctgagccttccctggttcaccccggcacagacaagggcactgaggccaag
gaccctccagctgcagagagctacccccctccaccagctccggctcccactgatggcagt
gagccagccccggctcccgttgccgacggagacatccccagccagtttacacgggtgatg
ggcaaagtgtgcacccagctgctggtgtcccgaccggacgaggagaacatcaccagttac
ctccagcttattgaaaagtgcctgactcatgaggcgttcacggagacgcagaagaaacgg
ctgctgtcctggaaacagcaagttctgaagctcctccggaccttcccgcgcaaagccgct
ctagagatgcagagctaccggcagcagaaaggctgggcattcggctccaactcgcttccc
atagctggctctgtggggatgggggtggcccggcggacccagcggcagttccccatgcct
ccccgggccctcccacccggtaggatgggccttctgagcccttcaggcatcgggggcatc
tccccacgacatgctctcactagccccagccttgggggccagggccgacagaacctgtgg
tttgccaaccctggaggcagcaacagcatgcccagccagagccgtagctctgtgcagcgc
acccactccctcccggtccattcctcaccccaggccattctcatgttccctccagactgc
ccggtccctgggcctgacctggagatcaatcccactctggagtctctgtgtctgagcatg
acagaacacgccttgggtgatgggacagacaaaacctccaccatctga
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