Mustela nigripes (black-footed ferret): 132006206
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Entry
132006206 CDS
T09425
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132006206 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132006206 (FIP1L1)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132006206 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
132006206
NCBI-ProteinID:
XP_059239967
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Position
1:244791290..244867108
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AA seq
603 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAA
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatctggaattgaagacgaaactgctgaaaatggcgtgccgaaaccgaaagtgaccgag
actgaagatgatagtgatagtgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggcgcaccacagtatgggagttacggtacagcacctgtaaatctt
aacatcaaaacagggggaagagtttatggaactacagggacaaaagtcaaaggggtggac
cttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattccttt
gaagataaaccatggcgtaaaccaggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaagcagcacttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattccagcgttggaaagtggcaggaccggtatggg
agggccgaatcacctgacctaaggagattacctggggcaattgatgttattggtcaaact
ataacaattagccgagttgaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccatttttc
cccccaggagctcctcccacccaccttccacctcctccatttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtgga
cattcctctggttatgatagtcgttctgcacgtgcttttccatatggcaatgttgccttt
ccccaccttcctggttctgctccttcatggcctagtcttgtggataccagcaagcagtgg
gactattattcaagaagagagaaagatcgagatagagaccgagacagagatcgggaacga
gaccgtgatcgagacagagaaagagaacgcaccagagagagagagcgggagcgtgatcac
agtcctacaccaagtgtttttaacagtgacgaagaacgatacagatacagagaatatgcg
gaaagaggctacgagcgccacagagcaagtcgagagaaagaagaacgacacagagaaaga
cgacacagagagaaagaggaaaccagacacaagtcctctcgaagtaacagtagacgtcgc
catgaaagtgaagaaggagacagtcacaggagacacaagcacaaaaaatctaagagaagc
aaagaaggaaaagaagctggcagtgagcccgcccctgaacaagagagcaccgaagccgca
ccggccgaatag
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