Mustela nigripes (black-footed ferret): 132006994
Help
Entry
132006994 CDS
T09425
Symbol
SMARCA1
Name
(RefSeq) probable global transcription activator SNF2L1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132006994 (SMARCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132006994 (SMARCA1)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
132006994 (SMARCA1)
CERF complex
132006994 (SMARCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
132006994
NCBI-ProteinID:
XP_059241158
LinkDB
All DBs
Position
X:20708926..20786764
Genome browser
AA seq
1035 aa
AA seq
DB search
MEPDSAAVAATVAPANATATIVVIEDEQPGPSTSKEEGAAAAATEATVATEKGEKKKEKN
VSSFQLKLAAKASKSEKEMDPEYEEKCLLVPLKADRAKRFEFLLKQTELFAHFIQPSAQK
SPTSPLNMKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSP
SCLQGCEGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICF
VGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL
SEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKL
VERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGK
MDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGS
RVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSKFIFMLSTR
AGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVER
AEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDITTLLER
GEKKTAEMNERLQKMGESSLRNFRMDTEQSLYKFEGEDYREKQKLGMVEWIEPPKRERKA
NYAVDAYFREALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKV
PRNPDIPNPAVAQREEQKKIDAAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKY
GRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKA
LDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNA
PQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRATKTPMSQKRKAES
ATESSGKKDVKKVKS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggagccggactccgctgcagtggcagccaccgtggcacccgctaatgcgaccgccaca
atcgtggtcatagaggacgagcagccggggccatccacctctaaggaggagggagcggcc
gccgcggccaccgaagccaccgtggccacggagaagggcgagaagaagaaggagaaaaat
gtttcttcatttcaactcaaacttgctgctaaagcttctaaatctgaaaaggaaatggac
ccagaatatgaagagaaatgtctgcttgtccctctgaaagcagaccgagcgaagagattt
gaatttttattaaagcagacagaactttttgcacatttcattcaaccttcagcacagaaa
tctccaacatctcctctgaacatgaaattgggacgtccccgaataaagaaagatgacaag
cagagcttaatttctgctggagactaccgccacaggcgcacagaacaagaagaagatgaa
gagctactctcagagagtcggaaaacatctaatgtgtgtgttagatttgaggtgtcacct
tcatgtcttcaagggtgtgagggtcttggtaagactttacaaacgattgctttgctcggt
tacctgaaacattaccgaaacattcctggacctcacatggttttagttccaaagtctact
ttatacaactggatgaatgaatttaaacgatgggtcccatccctccgcgttatttgtttc
gttggagacaaggatgtgagagctgcttttattcgtgatgaaatgatgccaggagaatgg
gatgtttgtgttacttcttatgagatggtaattaaagaaaaatctgtattcaaaaagttt
cattggcgatacctagtcattgacgaggctcatagaataaagaatgaaaaatctaagctt
tcagagattgttcgtgagttcaagtcaaccaaccgcttgctcctaactggaacgcctttg
cagaataacctgcatgaactctgggctttactcaactttttattgcctgatgtctttaat
tctgcagatgactttgactcttggtttgacactaaaaattgtcttggtgatcaaaaactt
gtggaaagacttcacgcagttttaaaaccatttttgttacgtcgtataaaaactgatgta
gagaagagcctgcctcctaaaaaggaaataaagatttacttgggactgagtaaaatgcaa
cgagaatggtatacaaaaatcctgatgaaagatattgatgtgttaaactctgctggcaag
atggacaagatgcgactcttaaacattctgatgcagcttcggaagtgttgtaaccatcct
tatttgttcgatggtgctgaacctggtccaccttataccactgatgagcacattgtcagc
aacagtggtaaaatggtagttcttgataaactgttggccaaactcaaagaacagggttca
agggttctcatttttagccagatgactcgcttgctggacattttggaggattattgtatg
tggcgtggttatgagtattgtcgactggatggacaaaccccacatgaagaaagagaggaa
gcaatagaggcctttaatgttcctaatagtagcaaattcatctttatgctgagtaccaga
gctggaggtcttggaattaacttggcaagtgctgatgtggttatattatatgattcagac
tggaatccacaggttgatctacaggctatggatcgagcacatcgtattggtcagaagaag
ccagtacgtgtgttccgtctcatcactgataatactgttgaagaaaggattgtagaaaga
gcagagataaaactgagacttgactcaattgttatacaacaaggaagactcattgaccaa
cagtctaacaagctggcaaaagaggaaatgttgcagatgatacgtcatggagccacccat
gtttttgcttctaaagaaagtgagctgacagatgaagacattacaactcttttggaaaga
ggggaaaagaagactgcagagatgaatgaacgcttgcagaaaatgggagagtcttctctg
agaaattttagaatggacactgaacaaagtttgtacaagtttgaaggagaagattataga
gaaaaacagaagcttgggatggtggaatggattgaacctcctaaacgagaacgcaaagcg
aactatgcagtggatgcctactttagagaggctttacgtgtcagcgagccaaaggttcca
aaggctccaagacctccaaagcagccaaatgtccaggattttcagtttttcccaccacgt
ttatttgagctcctggaaaaggaaattctttattataggaagacaataggctataaggtc
ccaaggaatcccgatattccaaatccagctgtggctcaaagagaggagcaaaaaaagatt
gatgcagctgaacctcttacaccagaagagactgaagaaaaagaaaaacttcttacccaa
ggattcacaaactggactaagcgagattttaaccagtttattaaagctaatgaaaagtac
ggaagagatgacattgataatatagctcgagaggtggagggcaaatcccctgaggaggtc
atggaatattcagctgtcttttgggaacgttgcaatgaattacaagacattgaaaaaatt
atggctcagattgaacgtggagaagcaagaattcaacgaaggatcagtatcaagaaagcc
ctggatgccaaaattgcaagatacaaggctccatttcatcagttgcgtattcagtatgga
accagcaaaggaaagaactatactgaggaagaagatagattcttgatttgtatgttacac
aaaatgggctttgatagggaaaatgtatatgaagaattaagacagtgtgtacggaatgct
cctcagtttagatttgactggtttatcaagtctagaactgccatggaattccagagacgc
tgtaatactctgatttcattgattgagaaagaaaatatggaaattgaggaaagagagaga
gcagaaaagaagaaacgggcaactaaaactccaatgtcacagaaaagaaaagcagagtca
gctactgagagctctggaaagaaggatgtcaagaaggtgaaatcctaa
DBGET
integrated database retrieval system
