Mustela nigripes (black-footed ferret): 132007614
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Entry
132007614 CDS
T09425
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04622
RIG-I-like receptor signaling pathway
mnp05161
Hepatitis B
mnp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
132007614 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
132007614 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
132007614 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132007614 (DDX3X)
03041 Spliceosome [BR:
mnp03041
]
132007614 (DDX3X)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132007614 (DDX3X)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132007614 (DDX3X)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132007614 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
132007614 (DDX3X)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132007614 (DDX3X)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132007614 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132007614
NCBI-ProteinID:
XP_059241857
LinkDB
All DBs
Position
X:complement(88078063..88094280)
Genome browser
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttccgataatcagagtggaggaagtacagcaagcaagggacgctatattcct
cctcacttaaggaacagagaagctactaaaggattctacgacaaagacagttcagggtgg
agttctagtaaagataaggatgcatatagcagtttcggatctcgtagtgattccagaggg
aaatctagtttctttagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cggagtgactatgatggcatcggcagccgtggtgacagaagtggttttggcaaatttgaa
cgtggtggaaatagtcgttggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttttctggaggaaacactgggattaacttt
gagaaatacgacgacattccagttgaggcaacaggcaacaactgtcctccacatattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttat
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgctcaaacagggtctggaaaaactgcagcgtttctcttacccatcttgagt
cagatttatgcagatggtccaggagaggctttgagggccatgaaggaaaatggaaggtat
gggcgtcgcaagcaatacccaatctccttggtattagcaccaactagagaattggcagta
cagatatatgaggaagccaggaaattttcataccgatccagagttcgaccttgcgtggtt
tatggtggtgctgatattggtcaacagatccgagacttagagcgtggatgccacttgtta
gtagctactccaggtcgtctagtggatatgatggaaagaggaaagattggattagacttt
tgcaaatacttggtgttagatgaagctgataggatgttggatatgggttttgaacctcag
atacgtaggatagttgaacaagatactatgccaccaaagggtgtccgccacactatgatg
tttagtgctactttccctaaggaaatacagatgctggcccgtgatttcttggatgagtat
atctttttagctgtaggaagagttggctctacctctgagaatattacacagaaagtcgtt
tgggtggaagagtccgataaacggtcatttttgcttgatctcctaaacgcaacaggcaag
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaagatttc
ttgtaccatgaaggatatgcttgtaccagtatccatggagaccgatctcagcgagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaaacatgttatcaactttgacttgccaagt
gatattgaagaatatgtacatcgcattggccgtacaggacgtgtagggaaccttggcctt
gccacctcgttctttaatgagaggaatataaacattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccgtcttggttagaaaacatggcttatgaacaccactac
aagggaagcagtcgtggaagatcgaagagtagcagattcagtggaggattcggtgcccga
gactatcggcaaagcagcggtgccagcagttccagcttcagcagcagccgcgcaagcagc
agccgcagtggaggcggcggccacggcagcagcagagggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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