Mustela nigripes (black-footed ferret): 132007671
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Entry
132007671 CDS
T09425
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04360
Axon guidance
mnp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132007671 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
132007671 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132007671 (L1CAM)
04090 CD molecules [BR:
mnp04090
]
132007671 (L1CAM)
04091 Lectins [BR:
mnp04091
]
132007671 (L1CAM)
Cell adhesion molecules [BR:
mnp04515
]
Immunoglobulin superfamily
L1 family
132007671 (L1CAM)
CD molecules [BR:
mnp04090
]
Proteins
132007671 (L1CAM)
Lectins [BR:
mnp04091
]
I-type lectins (Siglecs)
132007671 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_5
Fndc10
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
132007671
NCBI-ProteinID:
XP_059241898
LinkDB
All DBs
Position
X:1622935..1646522
Genome browser
AA seq
1252 aa
AA seq
DB search
MAVSLRYLWPLLLCSPCLLIQIPDEYEGYRVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTRDGVHFKPKEEVGVTVHQAPHSGSFTITGNNSNFAQRFQGTYRCFASNKL
GTAMSHEIQLMAEGAPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKP
RLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVAYQNHNKTLQLL
NVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLQKPQSRLYGPGETARLNCQVQGRP
QPEVTWRINGIPVEELAKDQKYRIQRGALILSHVQPSDTMVTQCEARNRHGLLLANAYIY
VVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLRDERFFPYTNG
TLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITRGPQSAIEKKGSKVTFTCQ
ASFDPSLQHSITWRGDGRNLQESGDSDKYFIEEGRLVIHSLDYSDQGNYSCVAGTELDVV
ESRAQLLVVGSPGPVPQLELSDRHLLEQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPQ
EWYSLGKVPGNQTSTTLKLSPYVRYSFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVD
VKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPLLVVSNTST
FVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEGVKILNSSAVLVRWWPVDPAQ
VKGHLRGYNVTYWWEGSQRKHSKRHIHRGHVVVPANTTSAVLGGLRPYSSYRLEVQAFNG
RGLGPASEMAFKTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYRPLDD
GDKEQLSFDLPDPELRTHNLTNLSPHLRYRFRLQATTKEGPGEAIVREGGTMALSGTPDF
GNISAMAGENYSVVSWVPKEGQCNFGFQIWFKALGDEKMSPHLPPQYVSYNQSSYTQWDL
QPDTDYEIHLLKERVLLKMAVKTNGTGRVRLPPAGFATEGWFIGFISAIVLLLLVLLILC
FIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDIKPLGSD
DSLADYGGSVDVQFNEDGSFIGQYSGKKEKEATGGNDSSGAASPVNPAGALE
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatcgctgcggtacttgtggcctctgcttctgtgcagcccctgcctgctcatc
cagattcccgacgaatatgaaggataccgggtgatggaaccacctgtcatcacggaacag
tctccacggcgcctggttgtcttccctacagatgacatcagcctcaagtgtgaggccagc
ggcaaacctgaagtgcagttccgctggactcgggatggcgtccacttcaaacccaaggag
gaagtgggtgtgaccgtgcaccaggcaccacactctggctccttcaccatcacaggcaac
aacagcaactttgcccagaggttccagggcacctaccgctgctttgccagcaataagctg
ggcacagccatgtcccatgagatccagctcatggctgagggtgcccccaagtggccgaaa
gagacagtgaagcctgtagaggtggaggagggggagtcggtggtcctgccttgccaccct
ccgcccagcgccgagccgctccgaatctactggatgaacagcaagatcttgcacatcaag
caggacgagcgggtaacgatgggtcagaacggcaatctctactttgccaacgtcctcacc
tccgacaaccactcggactacatctgccacgcccacttccctggcacccggaccatcatc
cagaaggaacccattgacctccgggtcaaggccaccaacagcatgatcgacaggaagccg
cgcctgctcttccccaccaactccagcagccatctggtggccttgcaggggcagccgctg
gtcctggagtgcattgccgagggcttccctacgcccaccatcaagtggctacgccccagt
ggccccatgccggctgacagagttgcctaccagaaccacaacaagacgctgcagctgcta
aacgtggccgaggaggacgacggcgagtaccggtgcctggccgagaactcgctgggcagc
gatcggcacacctactacgtcactgtggaggctgccccctactggctgcaaaagccccag
agtcgtctgtacgggcctggcgagactgcccgcctaaactgccaggtgcaggggaggccc
cagccggaggtcacctggagaatcaatggcattcccgtggaggagctggctaaggaccag
aagtaccgaatccagcgtggggccttgatcctgagccatgtgcagcccagcgacacgatg
gtgacgcagtgcgaggcccgcaaccggcacgggctcctgctggccaatgcctacatctat
gtcgttcagcttcctgccaagatcctgaccccagacaacgagacgtacatggcagtcgag
ggcagcaccgcctatcttctgtgcaaggcctttggagcccctgtgcccagtgtccagtgg
ctggacaaggaagggaagaccgtgctgcgggacgaacgtttcttcccttacaccaatggg
accctgggcatccgggacctccaggccaatgacactggccactacttctgccaggccgcc
aatgaccagaacaatgtgaccattgtggctaacctgcaggtcaaagatgccactcagatc
acgcgggggccgcagagtgcgatcgagaagaaaggctccaaagtgactttcacgtgccag
gcctcctttgacccctccttgcagcacagcatcacttggcgaggggacggtcgaaacctt
caggagtctggggacagtgacaagtacttcatagaggaggggcgcctggtcatccacagc
ctggactacagtgaccagggcaactacagctgtgtggccggcaccgagctggacgtggtg
gagagccgggcccagctcctggtggtggggagccccgggccggtgccccagctggagctg
tccgaccgccacctgctggaacagagccaggtgcgcctgtcttggagacccgccgaagac
cataacgcccccatcgagaagtatgacattgaatttgaagacaaggagatggcgcctcag
gaatggtacagtctgggcaaggtgccggggaaccagacctccaccaccctcaagctctcg
ccctacgtgcgctactccttccgagttactgccatcaacaagtacgggcctggagagccc
agcccagcctccgagaccgtggtcacacctgaggcagccccggagaagaaccctgtggac
gtgaagggggaagggaacgagaccagcaacatggtcatcacttggaagccccttagatgg
atggactggaatgccccccaggttcagtaccgtgtccagtggcgccctcaggggacacgg
ggtccctggcaggaacagatcgtgagcgaccccttgctggttgtgtccaacacgtccacc
tttgtgccttatgagatcaaagtccaggctgtcaacagccagggcaagggccctgagccg
cagattaccattggctactcgggggaagactacccccaggcaagccctgagctggaaggc
gtcaagatcctcaactctagcgccgtgctggtcaggtggtggccggtggaccccgcccag
gtcaagggccacctccgaggatacaatgtgacgtactggtgggagggcagtcagaggaag
cacagcaagaggcatatccacagaggccacgtggtggtgcccgctaacaccaccagtgcc
gtcctgggaggcctgcggccctacagctcctaccgtctggaagtgcaggccttcaatggc
cggggactggggcccgccagcgagatggccttcaagacccccgagggagtgccaggccac
cctgaggcgctgcatctggagtgccagtcggacaccagcctcctgctgcactggcagccg
ccactcagccacaacggcgtgctcaccggctacgtgctctcctatcgccctttggacgac
ggggacaaggagcagctgtcctttgaccttccggaccccgagctgcggacacacaacctg
accaacctcagcccgcacctgcggtaccgcttccggctgcaggccaccaccaaggagggc
cccggggaggccatcgtgcgggagggaggcaccatggccttatccgggaccccggatttt
ggcaacatctcggccatggccggcgagaattacagcgtggtctcctgggtccccaaggag
ggccagtgcaactttgggttccagatctggttcaaagccctgggggacgagaagatgagc
ccccatctgcccccgcagtacgtcagctacaaccagagctcctacacacagtgggacctg
cagcccgacaccgactacgagatccacctgctcaaggagagggtgctccttaagatggct
gtgaaaaccaacggcaccggccgtgtgagactccctcccgctggtttcgccactgagggc
tggttcatcggcttcatcagcgccatcgtcctcctgcttctcgtcttgctcatcctctgc
tttatcaagcgcagcaaaggcggcaagtactccgtgaaggacaaggaggacacccaggtg
gactccgaggcccggccaatgaaggacgagacctttggcgagtacagtgacaacgaggag
aaggcctttggcagcagccagccgtccctcaatggagacatcaagcccctgggcagcgat
gacagcctggccgactatgggggcagtgtggacgtgcagtttaatgaggacggctccttc
atcggccagtacagcggcaagaaggagaaggaggccacaggaggcaatgacagctcaggg
gccgcctcccccgtcaaccctgccggggcgctagagtag
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integrated database retrieval system
