Mustela nigripes (black-footed ferret): 132010458
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Entry
132010458 CDS
T09425
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132010458 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132010458 (TRIM71)
04121 Ubiquitin system [BR:
mnp04121
]
132010458 (TRIM71)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132010458 (TRIM71)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132010458 (TRIM71)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132010458 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
zf-B_box
DUF5711
COG5_N
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
132010458
NCBI-ProteinID:
XP_059244294
LinkDB
All DBs
Position
2:66503147..66571053
Genome browser
AA seq
658 aa
AA seq
DB search
MGFFANYVPSNGQFKGLLAPDWKGRQAGKCGAAGRAAVKTGGSPGGGGGGAAVGLCRDWA
SQPRAALAVRMLRTVLHLYCDTCSVPICRECTLGRHGGHSFIYLQEALQDSRALTIQLLA
DAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIR
QVKAKSLYLQVEKLRQSLNKLESTISAVQQVLEEGRALDVLLARDRMLAQVQELKTVRGF
LQPQEDDRVMFTPPDQALYLAIKSFGFVSSGAFAPLTKATGDGLKRALQGKVASFTVIGY
DHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTMCNQH
IENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRI
QVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQVFTFEGQFLLKF
GEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSP
RGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIV
ADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcgctaattacgtgccttcgaatggtcagttcaaaggcctgctggcgcca
gactggaagggcaggcaggccgggaagtgcggggccgctggccgcgcggcggtcaagaca
ggagggagcccaggaggcggaggaggtggcgccgctgtgggcctctgccgcgactgggcc
agccagcctcgggccgccttagcggtgcggatgctgcggacggtgctgcatctgtactgt
gacacctgttcggtgcccatctgtcgtgagtgtacgttgggccggcatgggggccacagc
ttcatctacctccaggaggcgctgcaggactcacgggcacttaccatccagctgctggcc
gacgcgcagcagggccgccaggcaatccagttgagcatcgagcaggcccagacggtggca
gagcaggtggagatgaaggcaaaggtggtccagtcggaggtcaaagctgtgacggcaagg
cacaagaaggccctggaggagcgggagtgcgagctgctgtggaaggtggagaagatccgc
caggtgaaagccaagtccctgtacctgcaggtggagaagctgcggcagagcctcaacaag
ctggagagcaccatcagtgccgtccagcaggtgctggaggagggccgggcgctggatgtc
ctgctggcccgggaccgcatgctggcccaggtgcaggagctgaagaccgtgcgcggcttc
ctgcagccccaggaagacgaccgtgtcatgttcacaccccctgaccaggccctgtacctt
gccatcaagtcattcggcttcgtcagcagtggggccttcgcaccactcaccaaagccacg
ggggatggcctcaagcgggccctccagggtaaggtggcctccttcacagttattggctac
gaccatgatggggagcctcgcctctctggaggcgacctgatgtcagctgtggtcttgggc
cctgatggcaacctatttggtgccgaggtgagcgaccagcagaacgggacctatgtggtg
agttaccggccgcagctggagggcgagcacctggtgtcggtcaccatgtgcaaccagcac
atcgagaacagccccttcaaggtggtggtcaagtcgggccgcagctacgtgggcattggg
ctcccgggcctgagctttggcagcgagggcgacagtgacggcaagctctgccgcccctgg
ggcgtgagtgtggacaaggagggctacatcgtcgtggccgaccgcagcaacaaccgcatc
caggtgttcaagccatgtggcaccttccaccacaaatttggcaccctgggctcccgacct
gggcagttcgaccggccagctggcgtggcctgcgatgcctcccgcaggattgtggtggcc
gacaaggacaatcatcgcatccaggttttcacgtttgagggccagttcctgctcaagttc
ggcgagaagggaaccaaaaatgggcagttcaactacccttgggatgtggcggtgaattct
gagggtaagatcctggtttctgacacccgcaaccaccggatccagctgttcgggccagat
ggcgtcttcctgaataagtacggcttcgagggggctctctggaagcactttgactccccc
cgtggcgtggccttcaaccatgagggccacttggtggtcaccgacttcaacaaccaccgg
ctcctggtcatccaccctgattgccagtccgcgcgcttcctgggctccgagggcacgggt
aatgggcagttcctgcgcccacagggtgtggccgtggaccaggaggggcgcatcatcgtg
gccgactccaggaaccaccgcgtgcagatgttcgagtccaatggcagcttcctgtgcaag
tttggcgcccagggcagtggctttgggcagatggaccgcccgtctggcatcgctgtcacc
cccgacgggatgattgtggtggtggactttggcaacaatcggatcctcatcttctga
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