Mustela nigripes (black-footed ferret): 132010628
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Entry
132010628 CDS
T09425
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04068
FoxO signaling pathway
mnp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
132010628 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
132010628 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132010628 (RAG1)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132010628 (RAG1)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132010628 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
132010628
NCBI-ProteinID:
XP_059244364
LinkDB
All DBs
Position
1:complement(17954909..17958218)
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AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLASAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKKVSSEGKPSLE
QSPAVPDKADGQKPALSQPAVNVHPKFLKKSHDDRKERDKAIHQANLRHLCRICGNSFKT
DEHNRRYPVHGPVDGKTQVLLRKKERRATSWPDLIAKVFRMDVKADVDSIHPTEFCHNCW
RIMYKKFSSAPCEVSFPRNVTMEWHPHTPSCDICRAARQGLKRKSHQPNMQLSKKLKTAV
HRARRARRHKRRAKARISSKEVMQKISSCSHIHLSTKLLAVDFPAHFVKSISCQICEHIL
ADPVETTCKHVFCRICILRCLKVMGSYCPCCQYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEISLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTVMKITIAHGSEHVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKNSQLMLEMGGILRSFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVEELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAYKNSGFTLS
SQAGIGDPLGLEDSPETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcgcttctgccccagatgaaattcagcat
ccgcatattaaattttcagaatggaaatttaaactattcagggtgcgatcttttgaaaag
gcccccgaagaggctcaaaaagaaaagaaagtttcctctgaggggaaaccctctctggag
caatctccagcagtcccggacaaggctgatggtcagaagccagctctgagtcaaccagca
gtaaacgttcaccctaagtttctgaagaaatcccatgatgacaggaaagaaagagacaaa
gccatccaccaagccaaccttcgacatctctgccgtatctgtgggaattcttttaaaact
gatgagcacaatagaagatatccagtccatgggcccgtggatggtaaaacccaagtcctc
ttacgaaagaaggaaaggagagctacatcctggccagacctcattgccaaggtcttccgg
atggatgtgaaagcagatgttgactccatccaccccactgagttctgccataactgctgg
cgcatcatgtacaagaagtttagcagtgccccatgtgaggtttccttcccaaggaatgta
accatggagtggcacccccacacaccatcctgtgacatctgtcgcgctgcccgccaggga
ctcaagaggaagagccatcagccaaacatgcagctcagcaaaaaactcaaaactgcggtt
caccgagctagaagagcccgtcggcacaagagaagagcgaaggcaaggattagcagcaaa
gaagtgatgcagaaaatttccagctgcagtcatatacatcttagtaccaagcttcttgcc
gtggacttcccggcacactttgtgaaatccatctcctgccagatttgtgaacacatcctg
gctgaccccgtggagaccacctgtaagcacgtgttttgcaggatctgcattctcagatgc
ctgaaagtcatgggcagctactgtccctgttgccaatatccctgcttccctaccgacctg
gagagcccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgcaacgaggagatcagcttggaaaaatacaatcaccatgtgtcaagccacaag
gaatccaaggagactttggtgcatattaacaaggggggtcggccccgccagcatctcctg
tccttgacccgaagggctcagaagcaccgcctgagggagctcaaacttcaagtcaaggct
ttcgcggacaaagaagaaggtggagatgtgaaatcggtgtgtctgaccttgttcctgctg
gcactgagggccaggaatgagcacaggcaggcggacgagctggaggccatcatgcaggga
cggggctctggcctgcagccagctgtctgcctggccatccgtgtcaacaccttcctcagc
tgcagtcagtatcacaagatgtacaggactgtgaaagccatcactgggaggcagattttt
cagcctttgcatgcccttcggaatgctgagaaggtcctcctgccgggctaccaccccttt
gagtggcagccgcctctgaagaacgtgtcctccagcaccgacgtgggcattattgatggc
ctgtcagggttgtcctcctctgtggacgattaccctgtggacaccattgcgaagcggttc
cgctacgattcagctttggtgtctgctctgatggacatggaggaagacatcctggaaggc
atgagagcccaagaccttgatgactacctcaacggccctttcaccgtcgtggtgaaggag
tcttgcgacggaatgggagacgtgagcgagaagcacggcagcgggcccgtggttccagaa
aaggctgttcggttttcgttcacggtcatgaaaattacgatagcacatggctctgaacat
gtgaaggtgtttgaagaagtcaaacccaactctgaactgtgctgtaagcccctgtgtctc
atgctggcggatgagtctgaccacgagaccctgacggccatcctgagtcctctcattgct
gagcgggaggccatgaagaacagtcaattaatgcttgagatgggaggcatccttcggagt
ttcaagttcatcttcaggggcaccggctacgatgagaaactcgtgcgggaagtcgaaggc
ctcgaggcttctggctcagtctacatttgtaccctttgtgacgccacccgcctagaagcg
tctcaaaatctcgtcttccactccatcaccagaagccactccgagaacctggagcgctat
gaggtgtggcgttctaacccgtaccacgagtccgtggaagagctgcgggaccgggtgaaa
ggggtctcatcgaaacctttcatcgagacggtcccttccattgatgcgctccactgtgac
attggcaatgcagccgagttctacaagattttccagctagagataggggaggtgtacaaa
aatcccaacgcctccaaagaggaaaggaagagatggcaggctacgttggataagcatctc
cggaagaagatgaacctgaaaccgatcatgaggatgaacggcaactttgccaggaagctc
atgaccaaagagaccgttgaagcagtctgtgagttaattccctctgaggagaggcacgaa
gctctgagggagctgatggacctttaccttaagatgaagcctgtgtggcgatcatcgtgt
cctgccaaagagtgccccgaatctctctgccagtatagcttcaattcacagcgttttgct
gagctcctctctaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccctggcacatgtccctgaaattattgagagagatggctccattggggcatgggcg
agcgagggaaatgagtctggcaacaaactgttcaggcgcttccgaaaaatgaacgccaga
cagtccaagtgttatgagatggaagacgtcttgaaacaccactggctgtatacctccaaa
tacttgcagaagtttatgaatgctcataatgcatataaaaactccgggtttaccttaagc
tcacaggcaggcataggggaccccttaggcttagaggactctccggaaactcaagattcg
atggaattttaa
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