KEGG   Mustela nigripes (black-footed ferret): 132010695
Entry
132010695         CDS       T09425                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03020  RNA polymerase
mnp03420  Nucleotide excision repair
mnp04623  Cytosolic DNA-sensing pathway
mnp05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132010695 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132010695 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    132010695 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnp03021]
    132010695 (POLR2E)
   03400 DNA repair and recombination proteins [BR:mnp03400]
    132010695 (POLR2E)
Transcription machinery [BR:mnp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132010695 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     132010695 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     132010695 (POLR2E)
DNA repair and recombination proteins [BR:mnp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132010695 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 132010695
NCBI-ProteinID: XP_059244441
LinkDB
Position
2:complement(539973..546930)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKVIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctgtggaagatccgcaagaccatcatgcagctg
tgccatgaccgtggctacctggtgacccaggatgagctggaccagaccctggaagagttc
aaggcccagtttggggacaagccgagtgaggggcggccacggcgcacagacctcacggtg
ctggtggcccacaacgacgaccccactgaccagatgttcgtgttcttcccagaggagcct
aaggtgggaatcaagaccatcaaggtgtactgccagcggatgcaggaggagaacatcacg
cgggccctcatcgtggtgcagcagggcatgaccccgtccgccaagcagtctctggtggac
atggcccccaagtacgtcctggagcagtttctgcagcaggagctgctcatcaacatcacg
gagcacgagctggtcccagaacacgtcgtcatgaccaaagaggaggtgacagagctcctg
gcccggtataaactccgggagaaccagctgcccaggatccaggccggagaccccgtggcc
cgctacttcgggataaagcgagggcaggtggtgaaggtgatccggcccagcgagactgcc
ggcaggtacatcacctaccggctggtgcagtag

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