KEGG   Mustela nigripes (black-footed ferret): 132010827
Entry
132010827         CDS       T09425                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mnp  Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mnp03036]
    132010827 (KDM4B)
Enzymes [BR:mnp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     132010827 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     132010827 (KDM4B)
Chromosome and associated proteins [BR:mnp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132010827 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 132010827
NCBI-ProteinID: XP_059244706
LinkDB
Position
2:3437246..3568067
AA seq 1150 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSA
SRASLKAKLLRRQISLKENRHWRKTEEDRKASLERKKEQPRRPGPPSHRKRSQPKKPKPE
DPKSPGEGATGATLLEEPGSLKEEASQEADPEEEEEEPQLTPPQGREAEATEEDGRGKLR
PAKARSDRKKKSYGPPHPQHPLLPQLPPPPPTQFPAEEAPRPLPPLEPPVLAPGPVPAEE
NPLPPPLNVVPPEAPGEEPEVKPRPIIPMLYVVPWPGTACDKGRVSCQQAFEHFAQRGPT
WKEQAAPMELTGPEEESGAGEVQAPSTFSKLKMEIKKSRRHPLGKPPTRSPLTVVKQEAS
SDEEAFPFSGEEDMSDPEALRPLLSLQWKNKAASFQAERKFNAAAALTEPFCAICTLFYP
YSQSLQTEKEAPQASLGEGPSAAPPSKSGQKTRPLVPEMCFTASGENTEPLPANSYIGDD
GTSLLIACAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTD
RRWIHVICAIAVPEARFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCE
HCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGGHPVSAPPAPALRPQPPPALTQP
VPSRPQAQFLRAVSLGQTVITKNRNGLYYRCRVIGASAQTFYEVNFDDGSYSDNLYPESI
TSRDCVRLGPPPEGEFVELRWADGNMYKARFISSVTSHVYQVEFEDGSQLTVKRGDIFTL
DEELPKRVRSRLSLSTGAPQETAFSGEDVKAAKRPRVGTARAPEDSGRNPDYLAFMESLL
QAQCRPGAPF
NT seq 3453 nt   +upstreamnt  +downstreamnt
atggggtctgaggatcatggggcccagaacccgagctgtaaaatcatgacgtttcgccca
accatggaggaatttaaggacttcaacaaatacgtggcctacatcgagtcccagggagcc
caccgggcgggcctggccaagatcatccccccaaaggagtggaagccccggcagacctac
gatgacatcgatgatgtggtcatcccggcgcccatccagcaggtggtcacgggccagtca
ggcctcttcacacagtacaacatccagaaaaaggccatgactgtcggggagtaccgccgc
ctggccaacagcgagaagtactgtaccccgcggcaccaggacttcgatgacctggagcgc
aagtactggaagaacctgaccttcgtgtcccccatctacggggcagacatcagcggctct
ctgtacgatgatgacgtggcccagtggaacatcgggagcctgcggaccatcctggacatg
gtggagcgtgagtgtggcaccatcatcgagggcgtcaacaccccctacctgtacttcggc
atgtggaagaccacctttgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcacttcggggagcccaagtcctggtacgccatcccgccggagcacggcaagcgcctg
gagcggctggccatcgggttcttccccgggagctcccagggctgtgatgccttcctgcgg
cacaagatgaccctcatctcgcccatcatcctcaagaagtacggcatcccgttcagccgg
atcacacaggaggccggggagttcatgatcacgtttccctacggctaccacgccggattc
aatcacggcttcaactgtgcagaatctaccaatttcgccactctgcggtggatcgattac
ggcaaggtggccactcagtgcacgtgccggaaggacatggtcaagatctccatggacgtg
ttcgtgcgcatcctgcagccggagcgctacgagctgtggaagcaaggcaaggacctgacc
gtgctcgaccacacccggcccacggccctgagcagcccagagctgagcacctggagcgcc
tcccgggcctcgctcaaggccaagctcctgcgcagacaaattagtctgaaagaaaacaga
cactggagaaagactgaggaggacagaaaggccagtctagaaaggaagaaagagcagccc
aggaggccggggccgccgtcccaccggaaaaggagccagcccaagaagcccaagccggaa
gaccccaagtcgccaggggaaggggccacaggggccaccctcctggaggagcctggcagc
ctgaaggaggaggcctcgcaggaggcagaccccgaggaggaggaggaggagccccagctg
acgccaccgcagggtcgggaggctgaggccacggaagaagacgggaggggcaagctgcgg
ccggccaaggccaggagcgacaggaagaagaagagctatggtcctccgcacccccaacac
cccctcttgccccagctgccgccgcccccacccacccagttccccgccgaggaggcgccc
cggccgctgcccccgttggagcccccggtactggccccgggccccgtgcccgctgaggag
aaccccctgccgccacctctcaacgtcgtgccccccgaggcacctggcgaggagccagag
gtgaagccgcgccccatcatccccatgctgtatgtggtgccgtggcccggcacggcgtgt
gacaagggccgcgtgtcctgccagcaggcctttgagcactttgcccagaggggccccacc
tggaaggaacaggcggcccccatggagctgacgggtcccgaggaggagagcggagccggc
gaggtacaggccccgtccacgttttccaaactgaagatggagatcaagaagagccggcgc
caccccctgggcaagccgcccacccgctccccgctgaccgtggtcaagcaggaggcctcg
agtgatgaggaagccttccctttctccggggaggaggacatgagtgaccccgaggccttg
aggcctttgctctccctgcagtggaagaacaaggctgccagtttccaggccgagaggaag
ttcaatgccgcggccgcgctgaccgagcccttctgcgccatctgcaccctcttctacccc
tacagccagtccctacagaccgagaaggaggctccccaggcctccctcggggagggtccc
tcggctgctccgccttccaaaagtggccagaagactcggccgctggtccccgagatgtgc
tttaccgccagcggcgagaacacggagcccctccccgccaactcctacattggagacgac
gggaccagcctgctgatagcctgcgccaagtgctgcctgcaggtccacgccagctgctac
ggcatccgccccgagctggtgaacgaaggctggacgtgttcccggtgcgcggcccacgcc
tggactgcggagtgctgtctctgcaacctccggggaggagccctgcagatgacgaccgac
cggaggtggatccacgtgatctgcgccatcgctgtccccgaagcgcgcttcctgaacgtg
atggagcgccaccccgtggacatcagcgccatccccgagcagcggtggaagctgaagtgc
gtgtactgccggaagcgcatgaagaaggtgtcgggcgcctgcatccagtgctcgtgcgag
cactgctccacgtccttccacgtgacctgcgcccacgccgccggggtcctcatggagccg
gacgactggccctacgtcgtctccatcacctgcttcaagcacaagtcagggggccacccc
gtgagtgccccgcccgcccccgccctccgcccccagcctccgcccgcgctgacgcagcct
gtcccctcccgcccccaggcccagttcctgagggccgtgtccttgggccagacggtcatc
accaagaaccgcaacgggctctactaccgctgccgggtcatcggcgccagcgcgcagacc
ttctacgaggtgaacttcgacgacgggtcctacagcgacaacctgtacccggagagcatt
actagcagggactgcgtccggctgggacccccgcccgagggggagtttgtggagctgcgg
tgggccgacggcaacatgtacaaggccaggttcatttcctccgtgacgagccacgtctac
caggtggagttcgaggatgggtcccagctgacggtgaagcgtggggacatcttcaccctg
gacgaggaactccccaagagggtccggtcgcggctgtcgctcagcacgggggcgccgcag
gagaccgccttctcgggggaggacgtgaaggctgccaagcgcccgcgggtgggcaccgcg
cgggcccccgaggactcagggcggaacccggactacctggcgttcatggagagcctcctg
caggcgcagtgccggcccggggccccgttctag

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