Mustela nigripes (black-footed ferret): 132010992
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Entry
132010992 CDS
T09425
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
mnp04714
Thermogenesis
mnp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132010992 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
132010992 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132010992 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132010992 (SMARCA4)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132010992 (SMARCA4)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132010992 (SMARCA4)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132010992 (SMARCA4)
Chromatin remodeling factors
BAF complex
132010992 (SMARCA4)
PBAF complex
132010992 (SMARCA4)
GBAF(ncBAF) complex
132010992 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
132010992
NCBI-ProteinID:
XP_059245019
LinkDB
All DBs
Position
2:8081261..8169170
Genome browser
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccggacccacccctgggtggaactccgcggccaggcccttccccgggcccg
ggcccctcccctggagccatgttgggccctagcccgggtccctcaccaggctctgcgcac
agcatgatggggcccagtccggggcctccctcggcaggacaccccatcccaacccaggga
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcagatgacccccgctacaaccagatgaagggaatggggatgcggtcg
ggggcccatgctgggatggggccgccgccaagccccatggaccagcactcccaaggttac
ccctcccccctgggtggctccgagcatgcctccagtccggttccagccagtggcccgtcc
tcaggcccacagatgtcctctgggccaggtggggcccccctggatggtgctgatccccag
gctttgggacagcagaaccggggcccgactccgtttaaccagaaccagctgcatcagctc
cgagcccagatcatggcgtacaagatgctggccagggggcagcccctccccgaccacctg
cagatggcggtgcaggggaagcggccgatgcccgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgcgacaggacctggccccgggcctggccctggccctggccca
ggtccgggaccagcacctccaaattacagccggcctcacggtatgggaggacccaacatg
ccccccccaggaccctcaggagtgccccctgggatgccaggtcagccccccggagggcct
cccaagccttggcctgaaggacccatggcgaatgctgctgcccccacgagcacacctcag
aagctgatccccccgcagccaacgggccgcccctcacctgcgcccccagccgtcccaccc
gctgcctccccggtgatgccgccccagacgcagtcaccggggcagcctgcccagcctgcc
cccatggtcccgttgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgaatcgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctacgacaggaagtg
gtggtgtgcatgaggagggacacggccctcgagacggccctcaacgccaaggcctacaag
cgcagcaagcggcagtccctgcgtgaggcccgcatcactgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggagtacctcaacagcattctg
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaagctc
acgaaggcggtggccacctaccacgccaacacggagagggaacagaagaaggaaaacgaa
agaattgagaaagagagaatgcggagactcatggcggaagatgaggagggctaccgcaag
ctcatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacagacgagtac
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgctattgga
cctgatggcgagcctctggatgagaccagccaaatgagtgacctgccggtgaaagtgatc
cacgtggagagcgggaagatcctcacgggcaccgacgcccccaaagcggggcagctagaa
gcctggcttgagatgaacccgggatatgaagtagctccgagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaggaggagcagccgcagccagcacagcctccc
aacctgcctgttgaggagaagaagaagattccagacccagacagcgacgacgtctcggag
gtggacgcccggcacatcatcgagaatgccaagcaagatgtggatgacgagtacggcgtg
tcccaggccctcgctcggggcctgcagtcctactacgcggtggcgcacgcggtcactgag
cgagtggataagcagtcggcgcttatggtcaatggtgtcctcaagcagtaccagatcaag
ggcttggagtggctggtgtccctgtacaacaacaacctgaacggcatcctggccgacgag
atgggcctgggcaagaccatccagaccatcgctctcatcacgtacctcatggagcacaag
cggatcaacggaccctttctcatcatagtacctctctccacgctgtcaaactgggcatac
gaatttgacaagtgggccccctctgtggtgaaggtgtcctacaagggttctccagcagcc
agacgtgctttcgtcccccagctccgaagtggcaagttcaatgtcttgctgacgacttac
gagtacatcattaaggataagcatatccttgcgaagatccgttggaagtacatgatcgtt
gatgaaggccaccgaatgaaaaatcatcactgcaagctgacgcaggtcctcaacactcac
tacgtggcccctcgccgcctgctgctgacgggcacaccgctgcagaacaagctccccgaa
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgactggagaaaaggtggacctgaacgaggaggag
acgattctcatcatccgtcgtctccacaaagtgctgcggcccttcctgctccggcggctg
aagaaggaagtcgaagcccagttgcctgagaaggtggaatacgtcatcaagtgtgacatg
tctgcgctccagcgtgtgctctaccggcacatgcaggccaagggggtgctgctcaccgac
ggctccgagaaggacaagaagggcaagggcggcaccaagaccctgatgaacaccatcatg
cagctgcggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttctcc
gagcacttggggtttaccggtggcattgtgcaagggctggacctgtaccgagcctcgggg
aagtttgagctgctcgataggatccttcccaaactccgtgccactagccacaaagtgctg
ctgttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgcggc
tttaaatacctcaggcttgatggaacgacaaaagcggaggaccggggcatgctgctgaaa
accttcaatgagccgggctccgagtacttcatcttcctgctcagcacccgcgccgggggg
ctcgggctcaacctccagtcggccgacactgtgatcatcttcgacagcgactggaacccc
caccaggacctgcaagcccaggaccgcgcccaccgcatcgggcagcagaacgaggtgcgg
gtgctccgtctgtgcacggtcaacagcgtagaggagaagattctggccgcggccaagtac
aagctcaatgttgaccagaaggtgatccaggctggcatgttcgaccagaagtcctccagc
catgagaggcgtgccttcctgcaggccatcctcgagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcccgacgacgag
acggtgaaccagatgattgcccggcacgaggaggagtttgacctattcatgcgcatggac
ctggaccgcaggcgcgaggaggcccgaaaccccaagcggaagccgcgcctgatggaggag
gacgagctcccctcgtggatcatcaaggacgacgcggaggtggagcggctgacctgcgag
gaggaggaggagaagatgttcggccgcggctcccgccaccgcaaggaggtcgactacagc
gactcgctgaccgagaagcagtggctcaaggccatcgaggagggcacgctggaggagatc
gaagaggaggtccggcagaagaaatcgtctcggaagcgcaagcgggacagtgacgccggc
tcctccaccccgaccaccagcacccgcagccgcgacaaggacgacgagagcaagaagcag
aagaagcgcggccggccacccgccgagaagctgtccccaaaccctcccaacctcaccaag
aagatgaagaagatcgtggacgctgtgatcaagtacaaggacagtagtagtggacgtcag
ctcagcgaggttttcatccagctgccttcccgcaaggaactgcccgagtattacgagctc
atccgcaagcctgtggacttcaagaagataaaggagcgcatccgcaaccacaagtaccgc
agcctcaacgacctggagaaggacgtcatgctgctgtgccagaacgctcagaccttcaac
ctggagggctccctgatctacgaagactccattgtcctgcagtcggttttcaccagcgtg
cggcagaaaatcgagaaagaagatgacagcgagggcgaggagagtgaggaggaggaggag
ggcgaggaagaaggctctgagtctgagtcccgctccgtcaaagtgaagatcaagctgggc
cggaaggagaaggcgcaggatcggctgaaggggggccggcggcggccgagccgcggttcg
cgggccaagccggtggtgagcgacgacgacagtgaagaggagcaggaggaggaccgctca
ggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
