Mustela nigripes (black-footed ferret): 132011134
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Entry
132011134 CDS
T09425
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mnp04990
]
132011134 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
mnp04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
132011134 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NACHT
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
AAA_16
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NPHP3_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
KNTC1_N
CNH
AAA_22
Beta-prop_Vps41
AAA
Beta-prop_IFT122_2nd
Beta-prop_DCAF12
ATPase_2
nSTAND1
Beta-prop_EIPR1
AAA_5
nSTAND3
Motif
Other DBs
NCBI-GeneID:
132011134
NCBI-ProteinID:
XP_059245303
LinkDB
All DBs
Position
2:12960181..13021997
Genome browser
AA seq
1634 aa
AA seq
DB search
MCRARRPWRTKSLYSWDSCPCGKTSNKETRRNISAGDMDAEREALQSTAFPEVQTFCQKH
GLMFEVVDLRWGIRSSEATDHMTTELCLEELDRCRKTSIGPAFVFYGDVFATQQRVKFPT
SNVNDSTDLGYERTTTALLGDQYGPCPVPTLIEEKEWEALRTQLTSRPRDLELVARRFRR
DENSVPPTYLLQALGATEARGPEEATLTSVLRSGAQEAGRLGLITQEQWVRYHWSVIEWE
IDRGLLSLTDGDQGATVFLREIQDLNKHILDDCALKMVDRLADGCLDMDAQNLLGGLKGR
IADTQPGVLKTHHLPWSRDLVNPKNKTHARYLKELGEQFVARANHQVLEHLRELEASRQE
LAWLYQEIRHHMALSAEATRTFCGRQELLAQLGKRLRQSDSQPHSPLVLFGPPGIGKTAL
MCKLAEQTSGLLDRKTVTVLRLLGMSQMSSDARGLLPSLCFQLCLAYGLPLPPAQVLEAH
ARVVQLFHTLLHTVSCRNFESLVILLDSMDDMDSICRARRVPWLPSTCPPRVHLILSACS
GQQGVLDTLRRTLTDAEAFWEVKPLSGNQGQEMIQTLLAASRRTLSPEQRELVWASLPEC
GHPGRLRLAFEEARKWASFTIPAPLGSTAEEAMHQLCARLEQTHGQLLVAHVLGYLASSR
HGLSEAELKDVLSLDDEVLQAVYQDWTPPSKELLRFPPLMWVRLRRDLGHCLARRPVDGF
TLLAIAHRQLAEVVQERYLSRPERAKRHGVLADFFSGAWSLGTKKLITLPLVGKPLNLDR
KVAPQPLWFSDTVANLRKLKELPHHLVHSGRTEELKQEVLGNMNWISCRGISGGIEGLLE
DFDLYGPHLDCPEVSLVRDALQLCRPAVELRGMERSILYTELLARLHFFAASHPALVGQL
CQQAQSWFRACPHPVLIPLGGFFQPPGGPLRATLTGCHKGITAMAWSLEERLLVVGTQDG
IVAVWDMEEQQVIHILTGHTGEVKNVKVFAKGTLALSASKDHTLRLWDLLSGQEKFTIWD
RGSRDPTEPEIWSLHVEEAKKVVYLASGSKISAWNLETAELVFRILGHVSDRWMCTRALA
SRAMLLTVSEAGVVSLWSSATGTLQGRQHLSSVKEETPTCGVSVQKQGKMVTGFSKGSIS
LVSPEGDSLLEKLPEAVRFLVLSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDM
VETAGFGPKNNLIITGSRDALIQVWSLSEQGTLLDILEGVGAPVSLLAWGGALVASASQQ
SSSFKVWDLTYLQKPRACTPFLDRTGLTAVSHNGGYIYFPKIGDKNKVTIWDSAEGEEQD
ALDTSNEVRCLEVAQQANLLFTGLVSGVVLVFPLNSRQDVMCIPPPEARKAINCMALSQG
EERLAIAYDSIVLVLDISPGDPCPVIDGPTYTFYTQLPETISSVAVLADYRVIYGMTNGD
LFLYECVNSKVFPLEAHRSRVTCMQVSHREQLAVSGSEEALLCLWDLQACKWTFQMNYTN
SYCRGVQCLCFSMDDKYVYAGLKDRSIIVWSVLDGTLLAVQFVHAVVNRIIPTSNGFIAP
TRHGYLIRERFQCPSSRTSQQDPLKNFKKAVWKVKSRQREELAAAAGTLQDLRSASAQGN
ECKSNKRSQVCLLV
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgagcacgccgaccttggcggacaaagtccttgtactcatgggactcatgtcct
tgtggaaagacaagcaataaagaaacaagaagaaacatatcagctggtgatatggacgcg
gagagagaagctctgcagagcacggccttccccgaagtgcaaaccttctgccaaaagcac
gggctgatgttcgaggttgttgatctgaggtggggtattcggagctcggaggccactgac
cacatgaccacagaactctgcttggaggagctcgaccggtgtcggaaaacatccataggg
cctgcctttgtcttttacggagatgtttttgccacccagcaacgtgttaagtttccgacg
agcaatgttaatgattcgactgacttgggttatgaaaggacaaccacagccctcttaggt
gaccagtacggcccctgtccagtccccacgctgatcgaggagaaggagtgggaagctctg
agaacccagctgacctccaggccacgggacttggagctggtggctcgacgcttccggagg
gacgagaactcagtgccgcccacctacctgctgcaggcgctaggcgccacagaggcccgt
gggcccgaagaggccacactgacctctgtgctgcgctctggagcccaggaggctgggagg
ctgggcctcatcacccaggagcagtgggtccgctaccactggtcagtcatcgaatgggag
atagaccggggcctgctgagcttgacggacggagaccagggggcgaccgtcttcctgaga
gagatccaagacctcaacaagcacatcctggacgactgcgccctcaagatggtggaccgg
ctcgcagatggctgcctggacatggatgcccagaaccttctcggtggcctcaagggacgc
attgctgacacccaacctggagtcctcaagacccaccacctgccatggagccgagacctg
gtgaaccccaaaaacaagactcatgctcggtacctgaaggagctgggggagcagtttgtg
gccagggctaaccaccaggtcctcgagcacctccgggagctggaggccagccggcaggag
ctggcgtggctctaccaggagatccgccaccacatggcgctgagcgccgaggccacccgg
accttttgcgggcgccaggagctcctggcccagctagggaagcggctccggcagagcgac
agccagcctcactcacccctggtgctttttggacccccaggcatcgggaagacagctctg
atgtgcaagctggcagagcaaacttcaggactgcttgaccgcaagacggtgaccgtcctg
cggcttctggggatgtcacagatgagctccgatgcccggggcctgctcccgagcctctgt
ttccagctctgcctggcctacgggctgcccctgcccccggcccaggtcctggaggcccat
gccagggtggtccagcttttccacaccctcctccacactgtctcctgccgaaactttgag
tccctggtgatcctgctggactccatggatgacatggattccatctgccgggcccggagg
gtcccctggctgccctctacatgcccgccgagggttcacctcatcctctcagcctgctcg
gggcagcagggggttctagacaccctgcgacggacactgacagatgcagaggccttctgg
gaggtgaaacccctctctggaaaccaagggcaagagatgattcagaccctgctggcagcc
tcgaggaggacgctgagcccggagcagagggagctggtctgggccagcctcccagagtgt
ggccacccagggcggctgcggctggccttcgaggaggcccggaaatgggcctccttcacc
atcccggcccccctgggctccacggcggaggaagccatgcaccagctgtgcgcccgcctg
gagcagacgcacgggcagctcctggtggcccacgtgctgggctacctcgcttcttcccgg
catgggctctcagaggcagagctgaaggacgtcctgtccctggatgacgaggtcctgcag
gcggtgtaccaggactggaccccgcccagcaaggagctgttgcgtttcccacccttgatg
tgggtgaggctccgccgggacttgggtcactgcttggcccgtcggcccgtggacggcttc
acgctcctggccatcgcccacaggcaactggccgaggtggtccaagagcgctacctgtcc
aggccagagagagccaagaggcatggagtcttggctgacttcttctcaggagcctggagc
ctgggcaccaagaaactcatcactctaccgctggtggggaagcccttgaacctggaccgt
aaggtagcccctcagcccctgtggttctcagacacggtggcaaatctgcggaagctgaag
gagttgccccatcacctggtccactcaggccgcactgaagagctgaaacaggaggttctg
ggcaacatgaactggatttcctgccggggcatctctgggggcattgagggcctgttggag
gactttgacctgtatggccctcacctggactgtcctgaggtcagcctggtccgggatgct
ctccagctgtgccgcccggctgtggagctccgaggcatggagaggagcatcctgtataca
gaactcctggccagactccatttcttcgccgcctcacatccagccctggtgggacagctg
tgccaacaggcccagagctggttccgggcgtgcccccaccctgtgctcatacccctgggg
ggattcttccagcccccaggaggacccctccgggcaaccctcacaggctgccacaagggc
atcacggccatggcgtggagtctggaggaaaggctgctggtggttggcacccaggatggc
atcgtcgccgtctgggacatggaggaacaacaggtcatccacattctaactggacacaca
ggagaggtgaagaatgtgaaagtgtttgccaaggggacgcttgccctctctgcctcaaag
gaccacacgctgcgtctgtgggacttactctctgggcaggagaaattcaccatttgggac
agaggctcaagagatcccactgaacctgagatctggagtcttcacgtggaggaagcaaag
aaggttgtatatttggcatctggctcaaagatcagtgcttggaatctagaaacggcagag
ctggttttccgtatcctgggacacgtctctgaccgctggatgtgcaccagggcacttgct
tcccgggccatgctgctgactgtgtctgaggctggtgtggtcagtctgtggagctcagcc
acaggaacgcttcaggggaggcaacatttatccagcgtcaaagaagaaacaccaacctgt
ggggtctcggtccagaagcaaggcaagatggtgaccgggtttagcaagggctccatctct
ttggtttcccctgaaggagacagcctgctggagaagcttccggaagctgtgaggttcctg
gtactctctgaagacgagtcccttctggcagcagggtttggaagatctgtgcggatattc
ttggccgactcacaggggtttcatcgattcatggccactgaccttgaacacgaggacatg
gtggagacagctggttttggtcccaagaacaacctgattattactgggtcccgggatgcg
ctcattcaggtgtggagtctgtcggaacagggaaccctgctggacattctggaaggtgtc
ggagcccctgtgagcctgctggcctggggtggggccttggtggcatctgcttcccagcag
tcctcgtcttttaaagtctgggatctcacctaccttcagaaaccgagggcctgcaccccg
ttcctggatcgcaccggcctcacagcagtgtcacacaatgggggctacatttacttcccc
aagattggggacaagaacaaagtcaccatttgggactcagcggaaggggaggaacaagac
gccctggacacatccaatgaggtcaggtgtctggaggttgcccagcaggccaatctcctc
ttcaccggcctcgtttcgggggtggtgctggtgttccccctgaactccagacaggatgtg
atgtgcatcccccctcccgaggcccggaaagccatcaactgcatggcccttagtcaaggc
gaggagcgcctggccatcgcctatgacagcatcgtcctggtgctggacatcagccccggg
gatccctgtccggtcatcgacgggccaacctacaccttctacacccagctgcctgagacc
atatccagcgtggccgtgctggccgactaccgcgtcatctacggcatgaccaacggtgac
ctcttcctttatgagtgtgtgaattccaaagtgttccctctggaggcccacaggagtcgg
gtcacctgtatgcaggtcagccacagggagcagctcgcggtcagcgggtctgaggaagcc
ctgctgtgtctctgggacctgcaggcttgcaagtggacattccagatgaactacacgaat
tcttactgtaggggagtccagtgtctctgcttctccatggatgacaagtatgtgtatgcg
ggcttgaaggatcgctccatcatcgtctggagtgtgctagacggcactctgctggctgtc
cagtttgtccacgctgtggtgaacaggatcatcccaacttccaatggcttcatcgccccc
actagacacggctatctcatccgtgagcgtttccagtgcccttcgtcgagaacgtcacag
caggaccctctcaagaacttcaagaaggcggtgtggaaggtcaaatccagacagagagaa
gagctggcagctgctgccggaacactccaggacttgagatcagcaagtgcccagggaaat
gagtgcaaatcaaacaaacgctcccaagtctgcctgctagtgtag
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integrated database retrieval system
