Mustela nigripes (black-footed ferret): 132011143
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Entry
132011143 CDS
T09425
Symbol
USHBP1
Name
(RefSeq) harmonin-binding protein USHBP1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mnp03037
]
132011143 (USHBP1)
Cilium and associated proteins [BR:
mnp03037
]
Primary cilia and associated proteins
USH complex and associated proteins
132011143 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
132011143
NCBI-ProteinID:
XP_059245334
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Position
2:complement(13304773..13314907)
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AA seq
698 aa
AA seq
DB search
MSARATRPRSRRGRHAPPGELDPVAESSEEVEAASGSSELGPGPSQESPGPEAEASGQGL
GKRTNKEAEGDSSRGPAPSPEGPCKPAEEGQQAEDVAPLDGKTVPPRPEASDVFQTLQHA
LSSLEAAAAAWRHRPPSCPGPVEAGDRSGVGPRPCLEQEGAGGCQREAARLAERNDWLRL
ALGSREEELIRVRTSLQAIQAEKEMLQREVQELQDSLLRLEPFPPPSRGQAGASGSGSSS
SGVDEEPWGTQDPFPLAHPLLRRVRSDSRTQMLGPLPTRPLTPEIHIMDVRMEQLRGNIE
KLKCFNRLLSAVLQGYKGRCEGLSMQLSQREAEATALRMALQYSEHCEEVYGVLLTLREA
DSGAREGIPKGDLEVAEKEAQRLLAQEDTAMDGETPRDPQPSPEGSSVDRPTPQEVATQL
WGYVQRLQARRALVKIPPEPGPTLAPMPTVPHAEAMVQAILGTQPGPALPRLEKMQIQQD
LAATRESLADLMLRLQLVRREKRGLELREAALRAQGPAHVLLLEQLRWEQAQLGAGGASS
SGSDSSGGGSSGDEEEVSQGPPAILGGSRGIDGSQVGKAQGPETLAQELAASLNRALGLR
EQLHSLREELEQVAQKGRARRAQSAELNSDLCKAHSALVLAFRGAHRKQEEQRRKLEQQM
ALMEARQAEELEVLEATARALSRPRPPSRPPRLGETFL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcgggccacacgcccccgaagccggcgagggaggcacgctccgcctggggag
ctcgatcctgtggcagagagttccgaggaggttgaggcagccagcgggagttctgagctg
ggccctgggccatctcaggagagcccggggccagaggcagaggccagtgggcagggcctg
gggaagaggaccaataaagaggctgaaggggactctagcagaggacccgccccatctccc
gagggaccctgcaagcctgccgaggaaggccagcaggccgaagatgtagccccactggac
gggaagactgtcccccccaggcctgaagcctctgacgtgtttcagactctccagcatgct
ctgagctcactggaggcagcggctgctgcctggcgccaccggcccccaagctgtccgggg
cctgtggaggcaggagacagaagcggggtgggacccaggccctgcttggagcaggagggg
gcagggggttgccagagggaggctgcccgcctagccgaaaggaatgactggctgcgattg
gccttgggcagccgagaggaggagctgattcgcgtgcggacctccctgcaggccatccag
gctgagaaggagatgctgcagagagaggtccaggagctgcaggattccctgctgaggctg
gaacctttcccgcctccctcccggggccaagcaggggcctcaggcagtggctccagcagt
tccggggtagatgaggagccctgggggactcaggaccccttccccttggctcaccccctg
ctccggcgtgtccggagcgattcccgtactcagatgcttggacctctccccactcgacct
cttacccccgagatccacatcatggatgtgcggatggagcagctccgggggaacattgag
aagctcaaatgtttcaaccgtctgctgtcagctgtgctgcagggctacaagggccggtgt
gaaggcctgagcatgcagctgagccagagggaggcagaagccacagccctgcgtatggcc
ttgcagtacagcgagcattgcgaggaggtgtacggagtcctacttactctccgggaggct
gactcaggagcaagagagggaattcctaagggggacctggaggtggcagagaaggaagcc
cagaggctgctggcacaagaggacactgccatggatggagagacaccacgggatccacag
ccaagccccgaaggcagtagtgtagatcggcccacaccgcaggaggtggctacccagctc
tggggctatgtccagcgtctccaggcacgccgtgctctggtgaagattcccccagagcct
ggcccgactttggcacccatgcccactgtgccccacgcagaagccatggtgcaggccatt
ctggggactcagcctggcccggccctaccccgcttggagaagatgcagatccagcaggac
ttggcagctacacgggagagtctggcagacctgatgctgcggcttcagttggtgcggcgg
gagaagcggggtctggagctgcgggaggctgccctccgagcccagggcccagcccacgtg
ctcctgctggagcagctgcgctgggagcaggcccagctcggggctggtggggccagcagt
agtggcagcgacagcagtggaggcgggagcagtggggacgaagaggaggtgtcccagggc
cctcctgctatccttggtggcagcaggggcattgatggaagtcaggtgggcaaagcccag
ggcccggagactctggcccaggaactggcagcgtcacttaaccgggccctgggcctgcgg
gagcagctgcactctctgcgggaggaactggaacaggtggctcagaaggggcgagccaga
cgtgctcagagtgctgagctgaacagtgatttatgcaaggctcacagtgcccttgtcctg
gccttccgaggtgcccaccggaagcaggaagagcagcggaggaagctggagcagcagatg
gccctcatggaggctcgacaggcagaggagctggaggtgttagaagccacagcaagagca
ctgagcaggcccagaccaccctcccggccaccccggctgggagagacctttctgtag
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