Mustela nigripes (black-footed ferret): 132011370
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Entry
132011370 CDS
T09425
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
132011370 (DCAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mnp01001
]
132011370 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132011370 (DCAF1)
Enzymes [BR:
mnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132011370 (DCAF1)
Protein kinases [BR:
mnp01001
]
Serine/threonine kinases: Other
Other
132011370 (DCAF1)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132011370 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
132011370
NCBI-ProteinID:
XP_059245809
LinkDB
All DBs
Position
2:complement(20586574..20663657)
Genome browser
AA seq
1506 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVALRQESKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEIS
FHLDSGHKTSSRVNSAAKPEEGGLRKNKAAKQGDRENFRKAKQKLGFSTSDPDRMFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLGSHATVGASAPPAPAHPQPRPPQGSLALPGPSYAGNSPLIGRISFIR
ERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKN
PVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFR
PISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHL
EPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAH
IYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMN
ISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDL
MEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMD
TVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDD
NNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDI
ILSLNE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcggtgcatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaggagcatggcagtgggcaggacatggtacctattcttaccaggatgtctgaa
ttgattgaaaaagaaactgaagaatatcgtaagggagatccagacccatttgatgaccga
catcctggtcgagctgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtgaacgcatatgtgatgacaagccgagagccccct
ttaaacactgcagcttgtagactcctacttgacatcatgccagggctggaaactgctgtt
gtctttcaagaaaaggagggaattgttgagaatcttttcaaatgggcccgagaggctgat
cagccattgaggacatattctactggactgctaggaggtgctatggagaatcaagatatt
gctgccaactatagggatgagaattcacagctggtggcaatagtacttcgcagactgagg
gagctacagcttcaggaagtggctttgcggcaagaaagcaagcgtcccagcccacgaaaa
ctctcttctgaacctcttttgcctctggatgaagaagctgtggatatggactatggtgac
atggctgtagatgtagtggatggtgaacaagaggaggcctctggagacatggagatctcc
tttcatcttgattcaggccacaagaccagtagtagagtgaactcagcagccaaacccgaa
gaaggaggattgaggaaaaataaggcagcaaaacagggtgacagagagaattttaggaaa
gccaagcagaagttaggtttctcaacatctgatccagatcgcatgtttgttgagctgtct
aatagcagctggtcagaaatgtcaccttgggtgattggcaccaattataccctttatccc
atgactcctgctattgagcagcggcttattctccagtatctgacccccctaggagaatat
caggagttacttcccatattcatgcaacttggatcacgggaattgatgatgttctatatt
gacctgaaacagacaaatgatgtcctgcttacatttgaggcgcttaagcaccttgcatct
ctcctgctccacaacaagtttgccacagaatttgttgcacatggtggagtacagaaatta
ctggaaattcctcgtccttctatggctgcaactggtgtatccatgtgcttgtattacctg
tcctacaaccaagatgccatggaaagagtttgtatgcatccccacaatgttctgtctgat
gtggtgaactataccctatggttaatggaatgttctcatgcctcagggtgctgccacgct
accatgtttttctcaatttgcttctccttccgggctgtgttggagctctttgaccgctat
gatggtcttcgtcgtctggtgaatttgatcagtactttggagattctaaatttggaagac
cagggtgcacttctgagcgatgatgaaatatttgccagccgccaaactgggaaacatacc
tgcatggccttgcgcaagtactttgaggcccacttggccattaaattggaacaagtgaag
cagtcacttcagaggactgagggtggcattctcgtccatcctcaacccccatacaaggcg
tgttcatatactcatgaacagattgtggaaatgatggaatttttgatagagtatggccca
gcgcaactgtattgggaaccagctgaagtcttcctcaagctttcttgtgttcaactcttg
ttgcagcttatttctattgcctgtaattggaagacctattatgcaaggaatgacactgtg
cgctttgccttggatgtcctggctattctcactgttgtgccaaaaatccagctccagttg
gcagaatcagtggatgtgctggatgaagctggctccactgtctccactgtaggtatcagc
attattttgggagtggctgagggtgagttctttatccatgatgctgaaattcagaagtca
gcacttcagattatcatcaattgtgtgtgtggcccagataacagaatatccagtattggc
aaatttatctctggaactcctcggagaaagctgcctcagactcccaaaagcagcgagcac
accctggccaagatgtggaatgtggtccagtccaacaatggcatcaaggtgctcctgtcc
ttactgtccatcaagatgcccatcaccgatgcagaccagataagggctctggcctgcaag
gccctagtgggcttgtcacgcagtagcactgtccggcagatcatcagcaaactgcctctt
ttcagcagctgccagatccagcagctgatgaaggagcctgtcctgcaggacaagcgcagt
gaccatgtcaagttctgcaagtatgccgctgagctcattgaacgagtgtcaggaaagcca
cttctcattggcactgatgtgtctctggcacgactgcaaaaagcagatgttgttgcccaa
tcaaggatttccttccctgagaaagagctgcttctgttgatacgaaaccatctcatttct
aaagggcttggggagacagcaactgtgctgacgaaagaggctgacttgcccatgactgct
gcctctcattcatctgccttcaccccagtcactgctgctgcttctcctgtctctcttccc
cgaacccctcgcatcgccaatggcattgcaactcgactgggcagccatgccactgtgggt
gcctccgcccctcctgcccctgcccatcctcagccacggcccccccagggttcactagct
ttgcctggcccatcttatgcaggcaattcccccttgattggtaggatcagttttattaga
gagagaccatcaccctgcaatggcaggaaaatcagagtgttgcggcagaagtcggaccat
ggcgcctacagccaaagcccagccataaaaaagcagttggacagacatcttccttcccca
cctacgctggacagtatcatcacagagtatcttagagagcagcatgctcgctgcaagaac
ccagttgccacctgcccacctttctctctctttactcctcatcagtgtcctgagccaaaa
cagaggcggcaagcgccaataaactttacctcaaggctaaaccgcagggcctcatttcca
aagtatggaggggtagatggcggatgctttgataggcaccttatctttagcaggttccgt
cctatttcagtgttcagggaagccaatgaggatgagagtggcttcacttgttgtgcattc
tcagcacgggagcggttcctgatgcttggcacctgcactgggcagttaaagctctataat
gtgtttagtggacaggaggaggccagctataactgtcacaactcggctatcacacatctt
gaaccttccagggatgggtccttactcctgacatctgctacttggagccagcctctgtct
gcactttggggaatgaaatcagtatttgatatgaagcattccttcacagaagatcactat
gttgagttcagtaagcattctcaggatcgggtcataggtacaaaaggagatattgcccac
atttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgccaac
aactacaagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgatggc
gtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatgaat
atcagtggcgttttccatccgaatggactggaggtcatcattaatactgagatttgggat
cttcgtactttccatcttttacacacagttcctgctctggatcagtgtcgtgtggtgttt
aaccacacagggacagtgatgtatggagctatgctgcaggcagatgatgaagatgactta
atggaagagaggatgaaaagcccttttggatcatcctttcgaacatttaatgcaactgac
tacaaacctatagcaactattgatgtgaaacggaacatctttgacctgtgtacagacacc
aaagactgctatcttgctgtcattgagaaccaaggcagcatggatgctctgaatatggac
acagtgtgcaggctgtatgaagtgggcaggcaacgtttggcagaggatgaagacgaagag
gaggatcaggaagaggaagaacaggaggaagaagatgatgatgaagatgatgacgacact
gatgacctagatgagcttgacactgaccagttgctggaggcggagttggaggaggatgac
aacaacgagaacgcaggggaggatggggacaatgacttttctccctctgatgaggagcta
gcaaaccttctagaggagggagaggatggggaggatgaagactctgatgcagacgaggaa
gtggaactgatcctgggggacacggacagctctgacaactctgatttggaagatgacatc
atcttatctctgaatgagtga
DBGET
integrated database retrieval system
