Mustela nigripes (black-footed ferret): 132011501
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Entry
132011501 CDS
T09425
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132011501 (PDZRN3)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132011501 (PDZRN3)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132011501 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
132011501
NCBI-ProteinID:
XP_059246148
LinkDB
All DBs
Position
2:complement(40467109..40705745)
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AA seq
1067 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCNRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLIDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYCDPSDYMGGIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDLGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDQLHMDMLEEQHHQAMQFTA
GVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSTPL
AGQRKLTCSQDTLGSGDLPFSNESFLSADCADADYLGIPVDECERFRELLELKCQAKSSS
PYSLYYASSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHHSGFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RVAEGGGCAGGEGAAGSAEAYGPCPRNLLSITEDPEAGGASYSPPPPRELEPSQAPESRE
RRPSDDGGSPGPSPKLGGSYLPPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQ
MSLVSMCKDLHSAGAAEARMEWKVKVRSDGTRYITKRPVRDRLLRERALKIREERSGMTT
DDDAVSELKLGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILE
LSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgtgcgctg
tgccacaaggtcttggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgttgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcaaccgggtggtcaagctgcagcagctgcccgag
cacctcgagcggtgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctcctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaagagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggccctgcgggcgcacaacgcggcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggtaagcgcgagaagtcgctggtggca
cagctggccgcggcgcagctggagctgcagatgaccgccctgcgctaccagaagaagttc
accgaatacagcgcgcgtcttgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaaccaaaagtctgactcttgtcctacatcgggactctggctccctggga
ttcaatattatcggtggccggccgtgcgtggacaaccaagatggatcatccactgaaggc
atctttgtatccaaaatagttgacagcgggccggcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggtaaagacttatccagagcgacccatgaccaggct
gtggaagctttcaagaccgccaaggagcccattgtggtacaggtgttgaggagaacgcct
cggaccaaaatgttcacgcctccgtcagagtcgcagctgatagacacgggaacccagacg
gacatcaccttcgagcacatcatggcgctcaccaagatgtcctctcccacgccacctgtg
ctggatccttatctcctgccagaggagcatccctcggcccacgagtactgtgaccccagt
gactacatgggcggcatccatcaggaaatggacagggaggagctggagttggaggaagtg
gatctctacagaatgaacagccaagacaagctgggcctcaccgtgtgctaccggacagat
gatgaagatgaccttgggatttacataagtgagatcgaccctaacagcattgcggccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggctgtggctctcctaaccagtgaagaaaataagaacttttccttgctgatt
gcaaggcctgaactccagctggacgagggctggatggacgatgaccgcaacgacttcctg
gaccagctgcacatggacatgctggaggagcagcaccatcaggccatgcagttcaccgcg
ggcgtgctgcagcagaagaagcacgaagaagacggggggaccaccgatacagccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggacgcaccgacgagagcacgcgcaac
gacgagagctcggagcaggagaacaacggcgacgacgccaccgcctcgtccaccccgctg
gccgggcagaggaagctcacgtgtagccaggacaccctgggcagcggcgacctgcccttc
agcaacgagtccttcctgtcggccgactgcgccgacgccgactacctgggcatcccggtg
gacgagtgtgagcgcttccgggagctcctcgagctcaagtgccaggccaagagcagcagc
ccctacagcctgtactacgccagcagccccctggacgccagcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgggcgcacaagatgcagcagctccgcgagcagtaccgtgagtcgtggatg
ctgcaccacagcggcttccgcaactacaacaccagcgtggacgtgcgccgccacgagctg
tcggacatcaccgagctccccgagaaatccgacaaggacagctcgagcgcctacaacacg
ggcgagagctgccgcagcaccccgctcaccttggaaatgtcccccgacaactccttgagg
agagtggcggagggcggcggctgcgcgggcggcgagggggccgcggggagcgcggaggcc
tacgggccgtgccccaggaacctgctctccatcacggaagatccggaggcgggcggcgcc
agctacagcccgccgccgccccgagagctggagcccagccaggccccggagagcagggag
cggaggcccagcgacgacggcggcagccccggcccgagccccaagctgggcggctcctac
ctgccacctttcccgcactcgccctacaaacacgcgcacatcccggcgcacgcgcagcac
taccagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccag
atgagcctggtgagcatgtgcaaggacctgcactcggccggcgccgccgaggcccgcatg
gagtggaaggtcaaggtccgcagcgacggcacgcgctacatcaccaagcggccggtgcgc
gaccgcctgctgcgggagcgcgcgctcaagatccgcgaggagcgcagcggcatgaccacc
gacgacgacgccgtgagcgagctgaagctgggccgctactggagcaaggaggagcgcaag
cagcacgtggtgaaggccaaggagcagcggcgccggcgcgagttcatgatgcagagccgg
ctcgactgcctgaaggagcagcaggcggccgacgacaggaaggagatgaacatcctcgaa
ctgagccacaaaaagatgatgaagaagaggaacaaaaagatctttgacaattggatgaca
atccaagaactcctaacccacggcacaaagtccccggatggcacgagagtgtacaattcc
ttcttgtccgtgacgactgtataa
DBGET
integrated database retrieval system
