KEGG   Mustela nigripes (black-footed ferret): 132011556
Entry
132011556         CDS       T09425                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03013  Nucleocytoplasmic transport
mnp04141  Protein processing in endoplasmic reticulum
mnp04150  mTOR signaling pathway
mnp05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132011556 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132011556 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    132011556 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    132011556 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnp03019]
    132011556 (SEC13)
   04131 Membrane trafficking [BR:mnp04131]
    132011556 (SEC13)
Messenger RNA biogenesis [BR:mnp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132011556 (SEC13)
Membrane trafficking [BR:mnp04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    132011556 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    132011556 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    132011556 (SEC13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 132011556
NCBI-ProteinID: XP_059246303
LinkDB
Position
2:complement(51868774..51902286)
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacacggtggacacctcccatgaggacatgattcacgacgcccag
atggactactatggcacccgcctagcaacctgctcatcagacaggtctgtcaaaatcttc
gatgtgcgaaatggaggacagatcctcattgccgacctcaggggtcacgagggtcctgtg
tggcaagtggcctgggcccaccccatgtatggcaacatcctggcatcctgctcctatgac
cggaaagtcattatctggaaggaggagaatggcacctgggagaagacacatgagcacaca
ggacacgactcctcagtaaactccgtgtgctgggccccccatgactatggcctaatactg
gcctgcgggagctcagatggggccatctccctgctgacatacaccggggagggccagtgg
gaagtgaagaagatcaacaacgctcacacaattggctgcaatgctgtcagttgggcccct
gctgttgtacctggaagcctaatagaccagccatcagggcaaaagcccaactacatcaag
aagtttgcatcaggcggctgtgacaacctcatcaaactgtggaaggaggaggaggacggc
cagtggaaggaggaacagaagctagaagcgcacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagttgctcccaggatggtcgtgtg
ttcatctggacttgtgatgacacctcaggcaatacatggtcacccaaactgttgcacaag
ttcaatgacgttgtgtggcatgtgagctggtccatcacagccaacatcctggctgtctcg
ggcggagacaataaggtgaccctgtggaaggagtccgttgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccagggttccgtgtcggcttccgtcacagagggccagcagaat
gagcagtga

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