Mustela nigripes (black-footed ferret): 132011577
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Entry
132011577 CDS
T09425
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132011577 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132011577 (MBD4)
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132011577 (MBD4)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
132011577 (MBD4)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132011577 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
132011577
NCBI-ProteinID:
XP_059246360
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All DBs
Position
2:complement(54242476..54253793)
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AA seq
565 aa
AA seq
DB search
MAGMESPSLGDCGAAPSVTSSERLAADPHCDLRQEDGALGLESMGENEKQVMIKSSSECN
LLLQESIASAQTSDTTMTECHKSVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKS
SLVKYLHKNEETSLTPEDFDFTVLSKKGIKSRYKNRNVAPLTSQMQSESNSSNRNLRTRS
WWKKDVFPLPSSCLELQSSKGLSNFKDKGVTDMDSRKVRKSKEKVPILKGIQIKRNKTRC
QKGLPDSAQSNKKRKSEYKKADDESEPVVQESQLDKTLSIDAGTSNKTLSATSEEKKLVK
EQSLSLVSNFCSEQITSGIINKLCSTEEAEHSKKCEETFLESEEIKSKVQVGERKEHLHT
DILKCGSEMDNNCSQTEKDSVEMCQEDTIPRTQIEKRKTSLYFSSKYNREALSPPRRKAF
KKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARTAD
WRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKQ
VHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatggagagtccgagcctgggagactgcggagctgctccctcggtcacgtcc
agtgagcgcttagccgcagacccgcactgtgacctccgccaggaagatggtgctctggga
ttggaaagcatgggagaaaatgagaaacaagtaatgataaaaagcagcagtgagtgtaat
ctcctgctgcaagaatccattgcttctgctcagactagtgatactactatgacagaatgc
cataagtctgtcccatgcggatgggaaagagttgtgaagcagaggttatcagggaaaaca
gcaggaagatacgatgtatattttatcagcccacaaggactgaagtttagatccaaaagt
tcacttgttaagtatcttcacaaaaatgaagaaacttctcttacgccagaagattttgat
tttaccgtactttctaaaaaaggcatcaagtcgagatataagaaccgcaacgtagcacct
ctgacatcccaaatgcaaagtgaaagtaatagttcaaaccggaacctcaggacacgaagc
tggtggaaaaaagatgtctttcctctaccaagcagttgtctggaattgcaaagtagcaaa
ggactatctaactttaaagataagggtgttactgacatggactccagaaaggttagaaag
tccaaagaaaaggtgcctattttgaaaggaattcaaattaagagaaataaaacaaggtgc
cagaagggtcttccagattctgctcaaagtaataagaaaagaaaatctgagtataaaaag
gcagatgatgaaagtgaacctgttgtgcaagaaagtcagcttgataaaacactctccatt
gatgctggaacaagcaacaagaccctcagtgcaaccagtgaagaaaagaaacttgtaaaa
gaacaatcattgagtttggtatcaaatttttgttctgaacaaataacttctggcatcata
aacaaattatgttcaactgaagaagcagaacacagcaagaagtgtgaggaaaccttttta
gaatctgaggaaataaaatcaaaagtacaagttggggaaaggaaggaacatttgcataca
gacattttaaaatgtggctctgaaatggacaacaactgctcacaaaccgagaaagactct
gtggaaatgtgtcaagaagataccattccacggacacaaatagaaaaaaggaagacaagc
ctgtatttttccagcaaatataacagagaagctcttagtccccctcgacgcaaagccttt
aagaagtggacccctccccggtcaccttttaatcttgtccaagagacacttttccacgat
ccatggaagctcctcattgctaccatatttctcaaccggacctcaggcaaaatggcaatc
cctgtgctctgggagtttctagagaagtacccttcggctgaggtagcaagaaccgcagac
tggagagatgtgtcagaacttcttaaacctcttggtctctatgatcttcgagcaaaaacc
attatcaagttctcagatgaatatctgacaaagcagtggaggtatccaattgagcttcat
gggattggcaaatatggcaatgactcttaccgaattttttgcgtcaatgagtggaagcag
gtacaccctgaagaccataagttaaataaatatcatgactggctttgggaaaatcatgaa
aaattaagtctgtcttaa
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