Mustela nigripes (black-footed ferret): 132011589
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Entry
132011589 CDS
T09425
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132011589 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132011589 (XPC)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132011589 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
SOG2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
132011589
NCBI-ProteinID:
XP_059246381
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Position
2:55687050..55740201
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AA seq
937 aa
AA seq
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MVRKRAAGREPQGREPCGRKAKGESMAGREEKEADVLEDEKPLKTSLLSKVSQGKRKRGC
SDPGGPAHGPAKKKVAKVTVKSENPTVVKDEALSDGEEFRDFTKGGKKAQPPQREAAVDK
GSCEGEDEEESEDDWEEVEELGEPVPGDMGENTAFSESVLPVEPVEIEIETPQQAKARER
SERIKVEFETYLRRMMKRFSKEVHEDTHKVHLLCLLANGFYRSNICSQPDLLAISLSIIP
ARFTRVPPRDVDACYLSNLVKWFVGTFTVNADLSTNERDDLQTTLERRFAIYSARDDEEL
VHIFLLILRALQLSTRLVLSLQPIPLKLPPAKGKKAPKVTSVEGAGGSLETCSPVLESQT
KPKTSQGTRQEVTSSKGPGRPSAKGKRSKAATVRKKQREPSSGEEEHKAGGQQEDTQRRR
HGRERQVASRVSYKEESGSDKGSSSSEFELSSGEAHHSSDEDSEPGLPRQRSKAGSRSDS
RTQRGRHPKHPGFLAATTSSSSSKSKRGKKIFSDGEGAERGKAAGVDQWLEVFCEQEEKW
VCVDCVHGVVGQALSCYKYATKPMTYVVGIDGDGWVRDVTQRYDPDWMTATRKCRVDAKW
WAETLRPYQSPLVEREKKEDSEFQAKHLGQPLPTVIGTYKNHPLYALKRHLLKYEAIYPE
TAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRARKARLAEP
QLQDHNDLGLFGEWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHRV
ARKLDIDCVQAITGFDFHKGYSHPITDGYIVCEEYKDVLLAAWEKEQALIEKREKEKREK
RALGNWKLLVRGLLIRERLKLRYGDEREERALQGPAGGGLSSDEEEGTSSQAEASRILAA
SWPQNREAEEQQKPKCPKKTKKEKVAAASHLFPFERL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggttcggaagcgcgcggccggtagggagccgcaaggacgcgaaccctgcggccggaag
gccaagggcgagagcatggccgggcgtgaggagaaggaggcggatgtcttggaagacgag
aaaccgttaaagacaagccttctctccaaagtctcacaaggaaagaggaagagaggctgc
agtgatcctggtggccctgcccacggtccagccaaaaagaaagtggccaaggtgactgtt
aaatctgaaaaccccacagttgtgaaggatgaagccctcagcgatggggaggagttcagg
gacttcacaaaaggtggcaagaaggcacagcccccacagagagaagctgctgtggacaaa
ggcagctgtgaaggagaagatgaggaagaaagtgaagatgattgggaagaggttgaagaa
cttggtgagcctgtgccaggtgacatgggagaaaacacagctttctctgaatctgtcctg
cctgtggaaccagtggagatagagatcgaaacaccccaacaggctaaagcaagggaaaga
agtgaaaggataaaagtggagtttgagacctatcttcggaggatgatgaaacgtttcagt
aaagaagtccatgaggacacacacaaggttcacctgctatgcctgctggcaaatggtttc
tatcgaagtaacatctgcagccagccagatctacttgctatcagcctgtccatcatccca
gctcgttttaccagagtgccacctcgggatgtggatgcctgctatctgtcaaacctggtg
aaatggttcgttggtacatttacagtgaatgcagacctctcaaccaatgagcgagatgat
ctgcagacaacattggaaaggaggtttgctatttactctgcacgggatgatgaagagttg
gtacatatatttttactgatcctccgggccctacagctctcgacccgactggttctgtct
ctgcagccgattcctctgaagttacccccagcaaagggaaagaaagctccaaaggtgaca
tctgtggaaggtgctggaggctccttggaaacttgcagcccagttctagaaagccaaacc
aaacccaagaccagccaaggaaccagacaagaagtcacatcatctaagggccctggccgt
ccaagtgccaaagggaagaggagcaaagcagctacagtcaggaagaaacagagagagccc
tccagtggggaagaagagcacaaggcaggagggcagcaggaggatacccagagacgtcgg
catggccgagagcggcaggtggcctccagggtgtcttataaagaagagagtgggagtgac
aagggtagtagcagttctgagttcgagctctccagcggggaagcccatcactcatctgat
gaggattctgaacctggccttcccaggcagagatcaaaggcagggtccaggagtgactcc
aggacccaacgtggaaggcaccctaagcaccctggcttcctagcagcaaccacaagctct
tcaagcagtaagagtaaacgaggcaagaaaatcttcagtgatggtgagggggcagaaaga
gggaaagcagctggtgtagaccagtggctagaggtgttctgtgagcaagaggaaaagtgg
gtgtgtgtggactgtgtgcatggtgtggtgggccaggctctgtcctgttacaagtatgcc
accaagcccatgacctatgtggtgggcatcgacggtgatggctgggtccgggatgttacc
cagaggtacgatccagactggatgactgcgacccgcaagtgccgggtcgatgccaagtgg
tgggctgaaaccttgagaccataccagagcccgttggtggagagggagaagaaagaagac
tcagagttccaggcaaagcacctgggccagcctttgcctactgtcattggcacatacaag
aaccaccctctgtatgcgctgaagaggcatctgttgaaatacgaggccatctaccctgag
acagctgcgattcttggctattgtcgtggagaagctgtctactccagggattgcgtgcat
accctgcactcccgggacacgtggctgaaacaggccagagtggtgaggctgggagaagtg
ccctacaagatggtgaaaggctactccaaccgggcccggaaggcccgccttgctgagccc
cagctgcaggaccacaacgacctgggcctgtttggcgagtggcagacggaggagtaccag
ccgcctgtggctgtggatggcaaggtcccccggaatgagtttgggaacgtgtacctcttc
ctgcccagcatgatgcccattggctgcgtccagctcaacctgcccaacctgcaccgcgtg
gcccgcaagctggacattgactgtgtccaggccatcaccggcttcgatttccataaaggc
tactcccatcccataaccgatgggtacattgtctgcgaggaatacaaagatgtgctccta
gctgcctgggagaaggagcaggcgctcattgagaagcgggagaaggagaaaagagagaaa
cgggccctcgggaactggaagctgttggtcaggggactgctcatcagggagaggctgaag
cttcgctatggggacgagagagaggagagagctctccaaggacctgctggaggtggactg
tcttctgatgaagaggaggggaccagctctcaagcagaagcatcgaggatcctggctgcc
tcctggccccagaaccgagaggctgaagaacaacagaaaccaaagtgccctaagaagacc
aaaaaggagaaggtggctgcggcctcccacctgttcccttttgagaggctgtga
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