Mustela nigripes (black-footed ferret): 132011973
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Entry
132011973 CDS
T09425
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132011973 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132011973 (VPS8)
Membrane trafficking [BR:
mnp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132011973 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
TPR_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
Beta-prop_WDR3_1st
zf-RING_5
Beta-prop_WDR5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
132011973
NCBI-ProteinID:
XP_059247355
LinkDB
All DBs
Position
2:complement(112113518..112360547)
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AA seq
1426 aa
AA seq
DB search
MENEPDHENVEQNLCAKTTEEELSKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVH
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLFYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAM
DHIEELVSLRPCKAAELVAIHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGVHVHQELV
QISPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDI
HGAFLIMLKRLQSKLQEITHQDEKTKEELSLKDVEDTMVETIALCQRNSHNLNQQQREAL
WFPLLEAMMAPQKLSGSTAPHLHPEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICL
QQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKVGKLSENS
SEVKKGKTVPSQVKMSPSCHPSKGDSAVKKAASEPVLDPQQIQAFDQLCRLYRGSSRLAL
LTELSQNRSSESYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagaacctctgcgccaagactactgaa
gaagagctgagtaaatctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggaattcaaaaatgatttgattgacgacaaggagtttgatattcct
caagttgatactcctccgacactggaaagcatacttaatgagactgatgatgaagaggag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtatccagtctgattgctgtgggtacatctcatggattggctttaatatttgatcag
aatcaagctttgagactctgtctgggtagtactagtgttggaggtcagtatggagccatc
tctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaaggacag
atcacaatgtgggatttggccagtggaaaacttctacgatcaataacagatgctcatcct
ccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatttgcaat
gacagcggaggctctgtttttgaactgacatttaagagagtgatgggagtgagaacatgt
gagtctaggtgtctattcagtggttccaagggtgaagtttgctgtattgagcctctccat
tcgaagcctgagttgaaagatcatcccatcacacagttttccttattggccatggcatcc
ttaacaaagatactggtcattggattgaaaccatctttgaaagtgtggatgacttttccc
tatggacggatggatccttccagtgttccattgctggcctggcactttgtggcagtacat
aattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctgttggtt
aagagagatgagtctggagcaattcatgttactaagcaaaagcaccttcacctcttctat
gatctcatcaactttacttggataaactcacgcacagttgtgctcttggacagtgtggag
aagttgcatgtgattgatcggcagactcaagaagaactggaaacagtggagatctcagaa
gttcagttggtctataacagcagccatttcaaatccctggccactggaggaaatgttagc
caggcactggctttggttggagagaaggcttgttatcaatccatcagtagctatggtggt
cagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctggagagag
agagtggatcatctcctcaaacaagattgtcttacagaagccttggctcttgcatggtct
ttccatgaaggaaaagcgaaagctgtagtgggattatcaggagatgccagtaagcgcaag
gctgttgttgccgatcggatggtagaaatccttttccactatgcagatcgagctctgaaa
aagtgtccagaccagggaaaaatccaagtgatggagcagcatttccaggacatggtgcct
gtcattgttgattactgcctgttgttagagcgaaaggatcttttatttagccaaatgtat
gacaaactaagtgagaattcagtggccaaaggagtgtttttggagtgccttgagccatat
attttaagtgataaattggtggggatgaccccacaggtaatgaaagacttgattgttcac
tttcaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggatatcacc
agcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgatgctatg
atctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaacttttcaga
gtcattgctcctcctttgaatgcaggaaggacgctaacagatgagcaagttgttatgggc
aacaagcttcttgtatatattagctgttgtcttgcgggccgagcctatccccttggtgat
atccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgattcgcttg
cattcagcagaagcgtcccccgaggaagaaatttacccctatgttcggactctgctacat
tttgacacaagagaatttctaaatgtattggcactgacctttgaagattttaaaaatgac
aagcaagctgtagaatatcaacaaagaattgtggatattttgttgaaagttatggtggag
aattccgatttcactccctcacaagttgggtgtctcttcacattccttgcccggcagctt
gcaaagcctgacaataccttgtttgtaaacagaaccctttttgatcaggtccttgaattc
ctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtccttttagaattg
ctgcaggctggaggcatagttcagtttgaagagagtcggctcatccggatggcagagaaa
gcagaattctatcaaatttgtgagtttatgtatgaacgagaacaccaatatgacaaaata
attgattgctacttacgtgaccctctaagggaggaagaagtctttaactacattcacaat
atcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaagctatg
gatcatatagaggaacttgtatccctgaggccttgtaaagctgcagagctggttgctatt
cacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttgcttttc
aaatttctgaggagtcttcttgacccaagggagggtgttcacgtacatcaggaattggtg
cagatatctccatgtgtgacggagcagttcattgagctattgtgtcaattcagcccaaac
caggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatccagatt
acccagaagtatcaacttcatgaagttactgcctacctattagaaaaaaaaggagatatt
catggtgccttcttaataatgctaaagagactgcaaagcaaacttcaagagataacacat
caagatgaaaagaccaaagaggagctctcattgaaggatgttgaagataccatggtagag
acaattgccctttgccagagaaattcccataatttgaaccagcagcaacgagaggcactc
tggtttccattactggaggcaatgatggccccccagaagctctctggatcaaccgcacct
catctgcacccagaagctctgaaatctctgaccatgcaagttctaaacagcatggcagca
tttattgcccttccatcgatcttgcaaagaatcttacaggatccagtttatggaaaagga
aaacttggagaaatccagggacttattctgggaatgttggacacctttaactatgaacaa
accctgctggaaacaactactagccttctaaaccaagatctccattggtcgttgtgtaac
ctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctatatgtttg
cagcagtacaagagacgccaagaaatggctgatgaaatcattgtctttagctgtggccat
ttgtaccactcattctgtctacaaaacaaagaatgcaccatagagaccgaggggcagacg
agatggacctgctacaaatgcagctcaagtaacaaagtagggaaattaagtgaaaactca
tctgaagttaaaaaggggaagacagtcccatcccaggtaaaaatgtctccttcttgtcat
ccatccaaaggagattctgctgttaagaaggcagcctcagaacctgtcctggacccacag
caaatccaagcttttgatcagctttgtcgtctctaccgaggaagttcccggctggctctc
ctcacagaactctcccagaatcgcagcagtgagagctacaggccattcagtggctcccag
agtggccctgctttcaacagcattttccagaatgagaatttccagctgcagctcattccc
ccgcctgtgactgaggactga
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integrated database retrieval system
