Mustela nigripes (black-footed ferret): 132012015
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Entry
132012015 CDS
T09425
Symbol
SOX2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04390
Hippo signaling pathway
mnp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
132012015 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
132012015 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132012015 (SOX2)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132012015 (SOX2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132012015
NCBI-ProteinID:
XP_059247453
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Position
2:complement(115134892..115137175)
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AA seq
321 aa
AA seq
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MYNMMETELKPPGPQQTSGGRRGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggg
cggcggggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaac
agcccggaccgtgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaaacgcctgggc
gccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctacacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgctcatgaagaaggataagtacacgctgcccggcgggctgctggccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggac
caactgggctacccgcagcacccgggcctcaacgcacacggcgccgcgcagatgcagccc
atgcaccgctacgacgtaagcgcactgcagtacaactccatgaccagctcgcagacctac
atgaacggctcgcccacatacagcatgtcctactcgcaacagggcacccccggcatggcg
cttggctccatgggctcggtggtcaagtccgaggccagctccagcccccctgtggttacc
tcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatg
tacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga
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