Mustela nigripes (black-footed ferret): 132012116
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Entry
132012116 CDS
T09425
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132012116 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132012116 (DHX36)
03012 Translation factors [BR:
mnp03012
]
132012116 (DHX36)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132012116 (DHX36)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132012116 (DHX36)
Translation factors [BR:
mnp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132012116 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
RsgA_GTPase
AAA_23
AAA_34
NACHT
Motif
Other DBs
NCBI-GeneID:
132012116
NCBI-ProteinID:
XP_059247692
LinkDB
All DBs
Position
2:139800726..139853798
Genome browser
AA seq
1013 aa
AA seq
DB search
MSYDYHQNWGRDGGPRNSGGGYGGSYGAGHGGGHGGNRGSGGGGGGGGGGGGRGGRGRHP
GHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNGKDAEAQI
SWFAPEDHGYGTESPTENKPNSEKKVENQEKKLISQEKRTFRIRDKYMDRDSEYLLQENE
PDVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCG
KTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIR
LQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLS
FRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHR
SQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMMDDDKVDLNLI
AALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQ
VFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKAN
AKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFL
SRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCL
DPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFR
YEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVI
CAGLYPKVAKIRLNLGKKRKMVKVYTKSDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTS
SIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDI
LLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNLPPRFQDGYYS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgattaccatcagaactggggccgggatggtgggccccgcaactccggcggg
ggctatggaggaagttatggggcgggccatggaggaggccatggagggaaccgaggctcc
ggaggcggcggcggcggcggaggaggaggtggtggtcgaggcggcagaggcagacatcct
gggcacctgaaaggccgcgaaatcggcttgtggtatgcaaagaaacagggacagaagaac
aaggaggcggagaggcaggagagagctgtagtacacatggatgaacggcgagaagaacag
attgtgcagctgctgcattcagtccaggcaaagaatggtaaagacgcagaagcacagatc
tcctggtttgctcctgaagatcacggatatggtactgaatctcctactgagaacaaaccc
aactcagagaagaaagttgaaaaccaggaaaagaaattgataagtcaagaaaagagaaca
ttcagaatcagggacaaatatatggaccgagattctgaatatctcttgcaagaaaatgaa
ccagatgtaactttagaccaacaactcttggaagatttacaaaagaaaaaaagtgacctc
cggtatatcgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaaggaa
ttggtaaatatgattgataaccatcaagtaacagtaataagtggtgaaactggatgtgga
aaaactactcaagttactcagttcattttggataactacattgaaagagggaaaggatct
gcatgcaggatagtttgtacacagccaagaagaattagtgccatttcagtcgcagagaga
gtggctgcagaaagggcagaatcttgtggcaatggtaacagtactggataccagattcgt
ctccagagtcggttgccaaggaaacagggttctatcttatactgcacaacaggaatcatc
ctgcagtggctccagtcagactcgcatttgtccagcgttagtcatattgtgcttgatgaa
atccatgagagaaatctacagtcagatgttttaatgacggttattaaagatcttctcagt
tttcgacctgacctgaaagtgatattgatgagtgcgactttaaatgctgagaaattttca
gaatatttcggtaactgtccaatgatacacatacctggttttactttcccggttgtggag
tatcttttggaagatataattgaaaaaataagatatgttccagaacaaaaagaacacagg
tctcagtttaagaggggtttcatgcaagggcatgtaaatagacaggaaaaagaagaaaaa
gaagcaatctataaagaacgctggccagattatgtaagggaactgcgaaaaaggtattct
gcaagtaccgtagatgttctggaaatgatggatgatgataaagttgatctgaatttgatt
gctgccctcattcgacacattgttttagaagaagaggatggtgcaatattggtctttcta
ccaggctgggacaatatcagcactttacatgatctcttgatgtcacaagtgatgtttaaa
tcagacaggtttcttattatacccctacattcactgatgcctacagttaaccagacacag
gtatttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaatattgcagag
actagcattaccatagatgatgtcgtttatgtgatagatggaggaaaaataaaagaaaca
cactttgacacacaaaacaacatcagtacaatgtctgctgagtgggttagtaaagctaat
gccaaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctatcatctgtat
aatggtcttagagcaagccttctggatgactatcagctaccagaaattttgagaactcct
ttggaagaactttgtttgcaaataaagattttaaggctaggtggaattgcttattttctg
agtaggttaatggatccaccatcagatgaagcagtgtcactctccataaaacacctgatg
gaactgaacgctttggataaacaagaagaattgacaccccttggagtccacttagcacga
ttaccagttgaaccacacatcgggaagatgattctttttggagctctgttctgttgttta
gatccagtacttaccattgctgctagtctcagcttcaaagatccctttgtcattccattg
ggcaaagaaaagattgcagatgcaagaagaaaagaattggcaaaagatactaaaagtgac
cacctgacagttgtaaatgcatttgagggctgggaagaagctaggcgacgtggtttcaga
tacgaaaaagactactgctgggaatattttttgtcttcaaacacattgcagatgctgcat
aacatgaaaggacagtttgctgagcatcttcttggagctggatttgtaagcagtagaaat
cctaaagatccaaaatctaatataaattcagataatgagaagataattaaagctgtcatt
tgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaaggaaa
atggtcaaagtttacacaaaatctgatggactggttgctattcatcctaaatctgttaat
gtggagcaaacagaatttcactacaactggcttatctatcatctgaagatgagaacaagt
agtatttacttatatgactgcacagaagtttccccatattgtctcttattctttggaggt
gatatttccatccagaaggataatgatcaggaaactattgctgtagatgaatggattgtc
tttcagtctccagcaagaattgcccatcttgttaaggaattaagaaaggagctagatatc
cttctgcaagagaagatcgaaagtcctcatcctgtagattggaaagacactaaatccaga
gactgtgctgtactgtcagctatcatagacttgatcaaaacacaggaaaaagcaagtccc
aggaacttaccaccacgattccaggatggatattacagctga
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