Mustela nigripes (black-footed ferret): 132012167
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Entry
132012167 CDS
T09425
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04360
Axon guidance
mnp04724
Glutamatergic synapse
mnp04726
Serotonergic synapse
mnp04929
GnRH secretion
mnp04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
132012167 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
132012167 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
132012167 (TRPC1)
04726 Serotonergic synapse
132012167 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
132012167 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mnp04040
]
132012167 (TRPC1)
Ion channels [BR:
mnp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132012167 (TRPC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
132012167
NCBI-ProteinID:
XP_059247785
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All DBs
Position
2:complement(150407266..150480208)
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AA seq
794 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggatctctcgggcgcctcctcctcctccctacct
tcttccccatcctcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggaacgaattcagaatcctgagtattcaacaactatggat
gttgcacctgtcattttggctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtgtctctacccaagccccatgcagttggctgtgaatgcacgttgtgttct
gcaaaaaacaaaaaggatagcctccgacattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaataatgttaacggaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaattaagtcttgtggaggtggaattcaggaatgattatgag
gaactagcccgacaatgtaaaatgtttgctaaagatttgcttgcacaagcgcggaattca
cgagaattggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcacagtctaactgccagcagttcctgaacactgtttggtttggacagatg
tcaggttaccgacgtaagcccacctgtaagaagataatgacagttttgacagttggcatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagttcggcagaatc
attcacactccttttatgaaatttattattcatggagcatcatatttcacgttcctgctg
ttactaaacctctactctcttgtctacaatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatctacttatactgtggattattgggatgatttggtcagacatt
aaaagactctggtatgaagggttagaagactttttggaagaatcacgtaatcaactcagt
tttgtcatgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaag
tttcatgattttgctgatcggaaggattgggacgcattccatcctactctggtggcagaa
gggctttttgcatttgcaaacgttctaagttatcttcgtctcttttttatgtatacaaca
agctccatattgggtccattacagatttcaatgggacagatgttgcaagattttggaaaa
tttcttgggatgttccttcttgttttgttttctttcacaattggactgacacaactgtat
gataaaggctataccccaaaagaacagaaggactgtgtaggcatcttctgtgaacagcaa
agcaatgataccttccattcgttcattggcacttgctttgctttgttctggtatattttc
tctttagcacacgtggcaatctttgtcacaagatttagttatggagaggaattgcagtcc
tttgttggagcagttattgttgggacgtacaatgttgtggttgtgatcgtgctcaccaag
ctgctggtggcaatgcttcataagagcttccagctgatagcaaatcatgaggacaaagaa
tggaagtttgctcgagcaaagttatggcttagctactttgatgacaaatgtacattaccc
ccacctttcaacatcattccttcaccaaagactatttgctatatgattagtagcctcagt
aagtggatttgctctcatacatcaaaaggcaaggttaaacgtcaaaacagtttaaaggaa
tggagaaatctgaaacaaaagagggatgagaactaccaaaaagtgatgtgctgcttggtg
catcgttacctgacgtccatgaggcagaagatgcaaagtacagatcaggcaaccgtggaa
aatctaaatgaactacgccaggatctgtcaaaattccgaaatgaaataagggatttactt
ggctttcggacttctaaatatgctatgttttatccaagaaattaa
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