Mustela nigripes (black-footed ferret): 132013518
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Entry
132013518 CDS
T09425
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132013518 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132013518 (BARD1)
04121 Ubiquitin system [BR:
mnp04121
]
132013518 (BARD1)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132013518 (BARD1)
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132013518 (BARD1)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
132013518 (BARD1)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132013518 (BARD1)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132013518 (BARD1)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
132013518 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
ANK_LRRK2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
132013518
NCBI-ProteinID:
XP_059249402
LinkDB
All DBs
Position
3:complement(24881037..24964071)
Genome browser
AA seq
767 aa
AA seq
DB search
MPGNRQPRVRSGNEPGPAPSMEPEGRGAWAHSRGALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDDKLSDLEE
DTSRGNLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQVINDEGARQASMYEFVS
ASPPTSVCERAKKASTRSRKKQKKKTLAEINQEWNLEAEREDGELDSKEELKEKLVSFCS
QPSVIASPRTNGEIDLLASGSVAESQGCGSFTEVSLPLAEHIDSPEAEGRSEDVTPEKKL
CENPRASGPSGRRGRRSGPSSPVPKRCRSSIPGTSRQRIVLADNKPLPGCSLPPSSKLKA
GDTLRRKNSNASDESTSLSPGTPLSALNSPSYRRMMSSPSAAKLSPTSLLAVKRNHRGET
LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT
GYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLLLPEKND
SSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNTVTHVIVP
GDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEREEKYEIPEGPQRSRLNKEQLLPK
LFDGCYFYFGGTFKYHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYHARPDSDQ
RFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgagggtccgctccgggaacgagcctggtcccgcgcccagt
atggagccggaggggcgcggggcctgggcccacagccgcggcgcgctcgaccggctggag
aagctgctgcgctgctcgcgttgcactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccgggtgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgacgataagctttcagatttggaagaa
gacacatctaggggaaatttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggttcagtcctcgaagtaagaaggtgcgatacgttgtgagtaaagtttcagtgcaaacc
cagcctcaggtgataaatgatgagggcgctcggcaggcctccatgtacgaatttgtttct
gcaagtcccccaacaagtgtttgtgagagggctaaaaaggcttctacaagatctagaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaacttagaggcagagaga
gaagatggtgaacttgactccaaagaggagttgaaggagaagctggtgtctttctgcagc
cagccatccgtcatcgctagtcctcggacaaatggtgagatagacttacttgccagtggc
tctgttgcggaatcacagggttgtggcagcttcactgaagtctctttaccgttggctgag
cacatagactctccagaagcggagggcaggagtgaagatgtgactcccgagaagaagctc
tgtgagaatcctcgtgcgtcaggtcccagtgggcgacgtggccgtcgcagcggaccgtcc
agtcccgtccctaagcgatgcaggagcagcattcctggcaccagcagacagcgcatagtg
cttgcagacaacaaaccattgcctggctgctccttaccaccctcgagcaaactcaaagct
ggtgacactctgaggaggaaaaacagtaatgcatcagatgagtccacgagcctctcccca
ggtacaccactgtccgcactgaacagcccgagttacagacggatgatgtccagcccctca
gctgcgaagctgtcacccactagccttctggctgtgaaaagaaatcatagaggagagact
ctgcttcatattgcttcaattaagggtgacataccttctgttgagtacctcttacaaaat
ggaagtgacccaaatgttaaagaccatgctggatggacaccattgcatgaagcctgcaat
catgggcacctgaaggtagtggagttgttgctccagcataaggcattggtgaacaccact
ggctatcagaatgactcaccgcttcatgatgctgccaagaatggacacttggatatagtc
aagctcttactttcctatggagcctctaggaatgctgttaacatatttggtttgcggcct
gtggattatgcagacggtgaaaatatgaaatcactattgttgctaccagagaagaatgac
tcatcatccactcgccattgctcggtaacgaacactggtcagcgtagggatggacctctt
gtgcttataggcagtggactttcttcagaacagcaaaaaatgctcagtgagcttgcagca
attcttaaggctaaaaaatgtgctgaatttgacaatacagtgactcatgtcattgttcct
ggggatacagttcaaagtaccctaaaatgtatgcttgggattctcaatggatgttggatc
ttaaaatttgaatgggtgaaagcatgtctccagagaaaagcatgtgaaagggaggaaaaa
tacgagattcctgaaggaccacagcgaagcaggctcaacaaggagcagctgttgccaaag
ctgtttgatggatgctacttctattttgggggaaccttcaaataccatccaaaggacaac
cttattaagcttgtcgccgcagctgggggccaggtcctcagtagaaagcccaagccagac
agtgacgtgactcagaccatcaatacggttgcgtatcatgcgagaccggactccgatcag
cgcttctgcacacagtatatcatctacgaagatttgtctaatcatcgcccagagagggtt
cggcagggcaaagtctggatggctccttccagctggtttatcgattgtgtgatgtccttt
gagctgctccctcttgacagctga
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