Mustela nigripes (black-footed ferret): 132013620
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Entry
132013620 CDS
T09425
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132013620 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132013620 (TRIP12)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132013620 (TRIP12)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
HECT type E3
132013620 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
132013620
NCBI-ProteinID:
XP_059249639
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All DBs
Position
3:complement(37556552..37702548)
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESPSETSKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS
GAAGSSRSQKRKRTENSCIKSGSVSESTGAEERSAKPTKLASKSAASAKAGCSAITDSSS
AASTSSSSSAVASASSTVPPGARLKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASASRRGSGLGKRGAAEARRQEKMADPESSQETVNSSAARTDETPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGAANGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTSVSSGTATAATNATADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDTVSREI
RLKRFLHVFFSSPLPGEEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVSNPLEVYLISAPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPAWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcgataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcgtca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcagaaaggcaa
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgccaaaaaaccaaaagcacttcagcatact
gaatctccctctgaaaccagtaagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaatcgccgtcaacaagtaaggctcataccagaaagagt
ggggccgctggcagttcacggagtcagaaaagaaagaggacagagaattcttgtataaag
agtggttctgtgtctgagtcaacgggtgccgaagagcgatctgcaaaacccaccaagctg
gcttcaaaatccgccgcctcggccaaagctgggtgcagcgccatcactgattcttcctcc
gctgcctcgacttcctcctcctcttctgctgttgcctcggcctcctctactgtaccacca
ggggccagactgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcagcgtcc
agtcccagtccgagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaattcgattgggctgctcgtttcagccctaaagttagccttcctaaaaccaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaaatctaccaagaagcgcagtgaatccccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtgccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaggagaaaatggcggac
cctgaaagcagccaggagaccgtgaattcttcagctgcacggacagacgaaactccccaa
ggagccgcagcctctagttctgttgcaggggccgtgggcatgaccacctctggggagagt
gaatccgatgattctgagatgggacgattacaagctttgttagaggccaggggtcttcct
cctcatctctttggccctctcggtccccggatgtcacaacttttccatagaacaattgga
agtggagctagctccaaggcccaacagcttctgcaaggactgcaagcaagtgatgaaagc
cagcagctccaggcagttattgaaatgtgtcagctattggttatgggaaatgaggagacg
ctgggagggtttcctgtcaagagtgtcgttccagctttgataacattacttcagatggaa
cataatttcgatattatgaaccatgcttgtcgagccttaacatacatgatggaagcactt
cctcgatcatctgctgttgtagtagatgcaattcctgtctttctagaaaagctgcaagtt
attcagtgtattgatgtggcagagcaggccctgactgccttggagatgttatcccgcaga
cacagtaaagccattctgcaggcgggtggtttggcagactgcttgctgtatctagaattc
ttcagcataaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagcatc
acgccagacgaatttcattttgtggcagattccctcccactgcttacccaaaggctaacc
catcaggacaaaaagtcagtcgaaagcacttgtctttgttttgcacgtctagtggacaac
ttccaacatgaggagaatttactccagcaggttgcctccaaagatctgcttacaaatgtt
caacagctgttggtagtgactccacccattttaagttctgggatgttcataatggtggtt
cgcatgttttctctgatgtgttccaactgtccaactttagctgttcaacttatgaagcaa
aacattgcagaaacacttcactttctcctgtgcggtgctgctaacggaagttgtcaagaa
cagattgatcttgttccacgaagtcctcaagaactgtatgaactgacatctctgatttgc
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgctgaagaag
ggaaatgcgcagaacacagatggtgcaatatggcagtggcgtgatgaccgaggcctctgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagtggatattcagagttaaagaaggatgatgctcgagcacagcttatg
aaagaggatccggaactggctaagtcttttattaagacattatttggtgttctttatgaa
gtgtatagttcctcagcgggacctgcggtcagacataagtgccttagagcaattcttagg
ataatttattttgcggatgctgaacttctgaaggatgtcctgaaaaatcatgctgtttca
agtcacattgcctccatgctgtcaagccaagacctgaagatagtagttggagcacttcag
atggcagaaatcttaatgcagaagttacctgatatttttagtgtttacttcagaagagaa
ggtgtaatgcatcaagtaaaacacttagcagaatcagagtctttgttgacaagtccacca
aaggcatgtacgaatgggtcgggatccttggggtccacgacgtcagtcagcagtggaaca
gccacagccgccactaacgccacggctgacttggggtccccgagcttgcagcacagcaga
gatgattctttagatctgagccctcaaggtcgattaagtgatgttctaaagagaaaacga
ctgccaaaacgagggccaagaaggccaaagtattcacctccaagagatgatgacaaagta
gacaatcaagctaaaagccctaccactactcagtcacctaagtcgtctttcctggcaagc
ttgaacccaaaaacgtggggaaggttaagcgcacagtccaacagcaacaacattgaacca
gcacgaactgcgggagttagtggtcttgccagggccgcctcaaaggacaccatatccaat
aatagagaaaaaattaaaggttggattaaggaacaggcgcataaatttgtagagcgttat
ttcagttctgagaacatggatggaagcaaccctgcgctgaatgtccttcagagactttgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtctgatgtttcatcgtttgaaatccaacacagtggattcgtg
aagcagctgttgctttatttgacatctaaaagtgaaaaggatactgtgagcagagagatc
agattaaagagattccttcatgtattcttttcttcaccacttcctggagaagagcccatt
ggaagagtagaaccagtgggtaatgcacctttgttggcattagttcacaagatgaacaac
tgcctcagccagatggagcaatttccagtgaaagtacatgacttccccagtggaaatggg
acaggaggcagcttttctctcaacagaggatcacaggctttaaaatttttcaacacacat
cagttaaaatgccagttacaaagacatccagactgtgcaaacgtgaagcagtggaaaggc
gggccagtcaagatcgatcccctggctttggtacaagctatcgagagataccttgtagtt
agagggtatggaagagtaagagaagatgatgaagacagtgatgatgatggctctgacgag
gaaatagacgagtctctggccgctcagttcttaaattctggcaatgtaaggcacaggcta
cagttctacattggagagcatttgctgccgtataacatgaccgtgtatcaggcagtccgg
cagttcagtatccaggccgaggatgagcgggagtccacggacgacgagagcaaccctctg
gggagagccggcatttggacaaagactcatacaatatggtacaaacccgtgagagaggat
gaagaaagtaataaagattgtgttggtggtaaaagaggaagagcccaaacagctccaaca
aaaacatcacctagaaatgcaaaaaagcacgatgagttatggcatgatggagtgtgccca
tcggtatcaaatcctttagaagtttacctcatatccgcgccacctgaaaatataactttt
gaagacccatcattagatgtgattcttcttttaagagttttacatgccatcagtcgatac
tggtattacttgtacgataacgcaatgtgcaaggagattattccaactagtgaattcatt
aacagtaagttgacagcaaaggcaaatcggcagcttcaggatccattagtaatcatgaca
ggaaacatcccagcatggctgactgaactcggaaaaacctgcccatttttcttcccattt
gatacccggcaaatgcttttttatgtaactgcatttgatcgggaccgagcaatgcaaaga
ttacttgataccaacccagaaatcaatcagtctgattctcaagatagcagagttgcacct
agattggataggaaaaaacgtactgtgaacagagaggagctgctgaagcaagcggagtct
gtgatgcaggatctgggtagctctcgggccatgttagagatccagtatgagaatgaggtt
ggtacaggtctcgggcctacactggagttttatgcacttgtatctcaggaactacagaga
gctgacttgggtctctggagaggtgaagaagtgactcttagcaatccaaaaggaagccaa
gaagggaccaagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggacg
gctaagccagctcacatcgcaaaggttaagatgaagtttcgcttcttaggaaagttaatg
gccaaggctatcatggatttcagattggtggaccttccccttggcttacccttttataag
tggatgctgaggcaggaaacttcactgacatcacatgatttgtttgacattgacccggtt
gtagccagatcagtgtatcacctagaagacattgtcagacagaagaaaagacttgaacaa
gataaatcccagaccaaagagagtctacaatatgcattagaaaccctgactatgaatggc
tgctcagttgaagatctaggattggatttcactctgccagggtttcccaacatcgaactg
aagaaaggaggaaaggatatacctgtcaccatccacaacttagaggagtatctaagactg
gttatattctgggcactaaatgaaggcgtttccaggcaattcgattccttcagagatgga
tttgaatccgtcttcccacttagtcatcttcagtacttctacccggaagaactggatcag
ctcttgtgcggcagcaaggcagacacgtgggatgcaaagacactgatggaatgctgcaga
ccagatcacggttatactcacgacagtcgggctgtgaagttcttgtttgagattctcagt
agttttgataatgagcagcagaggttatttctccagtttgtgacaggtagcccaagattg
cctgttggaggcttccggagtttgaatccacctttgacaattgtccggaagacatttgaa
tcgacagaaaaccccgatgacttcttgccctctgtcatgacttgtgtgaactatcttaag
ttgccggactactcgagcattgagataatgcgtgagaaactgttgatcgcagcgagagaa
gggcagcagtcgttccatctttcctga
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integrated database retrieval system
