Mustela nigripes (black-footed ferret): 132013655
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Entry
132013655 CDS
T09425
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04136
Autophagy - other
mnp04140
Autophagy - animal
mnp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132013655 (ATG16L1)
04136 Autophagy - other
132013655 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132013655 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132013655 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
mnp03029
]
132013655 (ATG16L1)
Membrane trafficking [BR:
mnp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
132013655 (ATG16L1)
Others
Rab GTPases of specific organelles
Auto phagosome
132013655 (ATG16L1)
Mitochondrial biogenesis [BR:
mnp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132013655 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
KASH_CCD
TolB_like
APEH_N
Vma22_CCDC115
CCDC93_CC
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
132013655
NCBI-ProteinID:
XP_059249723
LinkDB
All DBs
Position
3:40194812..40232263
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDAAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRALSRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGSSKEVRVPTAAMCVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYVWSVLSGKVEKVLSKQHGSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggggctccgcgccgcagacttcccccgctggaagcgccacatttcggaggag
ctgaggcggcgggaccggctacagaggcaggcattcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcctggacatgatgctgcctggaatgatagt
cagctacaagagatggcccagctgaggattaaacaccaagaagaactgactgagctacac
aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgtttgcagactatctctgac
ctggagacggagtgccaagaactacgcagtaagcttcaggaccttgaaagagccaaccag
accctgaaggatgagtatgatgccctacagatcacgtttactgccttggaggagaaactg
aggaaaactactgaagagaaccaggagctggtcaccaggtggatggctgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaagcccggcta
cagaaagagcttgcagaagcagcaaaggaacctctacccgttgaacaggatgatgacatt
gaagtcatcgtggacgaaacctctgatcacaccgaggagacatctcccgtgcgtgccctc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgatgctgccagg
aggcgttctgtctcttcctttccagttccccaggataatgtggatcctcatcctggttct
agtaaagaagtgagagtgccaacagcagcgatgtgtgtctttgatgctcacgatggggaa
gtcaacgctgtgcagttcagtccgggctcccggctgctggccacaggaggcatggatcgg
agagttaagctttgggaagtgtttggagataaatgtgagttcaagggctccctctctggc
agtaatgcgggaattacgagcatcgaatttgacagcgctggatcttaccttttagcagct
tcaaatgattttgcaagtcgaatctggactgtggatgattatcggttacggcacactctc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaacgcgcgtattgtt
tccggaagtcatgaccggaccctcaagctctgggatctccgcagcaaagtctgcataaag
acggtgtttgcaggatccagctgcaacgatatcgtttgcacggagcagtgtgtcatgagt
ggacattttgacaagaaaattcgtttctgggacatccgatcagagagcatcgtccgggag
atggagctgctgggcaagattaccgccctggacttaaacccagagagaacagagcttctc
agctgctctcgtgatgacctgctgaagatcattgatctgcggatcaatgctgtcagacag
acatttagcgcgcctgggttcaaatgcggctctgattggactagagttgtattcagccct
gatggtggttatgtggcagcgggctcagctgagggctccctctacgtctggagcgtgctc
tcggggaaggtggagaaggtcctttccaagcagcacggctcgtccatcaatgcggtagca
tggtccccttctggctcccatgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
tcagagtattga
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