Mustela nigripes (black-footed ferret): 132013751
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Entry
132013751 CDS
T09425
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132013751 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnp03041
]
132013751 (PRPF40A)
Spliceosome [BR:
mnp03041
]
Complex A
U1 snRNP components
U1 related factors
132013751 (PRPF40A)
Complex B
132013751 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
132013751
NCBI-ProteinID:
XP_059249952
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All DBs
Position
3:complement(50111337..50168423)
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AA seq
994 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVSAAHSDWTVGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHG
MMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAK
SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ
TKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSAAPVPTTE
IPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASNTVGGTGPVVPEPEVTSIVA
TVVDNENTVTISTEEQAQLTSTPAVQEQSMEVSSNTGDETAKQETVADFTPKKEEEESQP
AKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNA
YKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERD
RLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTF
AEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHE
HGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDIL
KDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKM
KRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHE
CQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESE
RSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKT
GKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgaggctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gcagcgcactctgattggacagtcgggaagcctgtcagcttattggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttggccccagtgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagcggagcgtggaggcctcatgatggggcatcctggcatgcattat
gccccaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgtacctcatgga
atgatgccgcaaatgatgccccctatgggagggccaccaatgggacaaatgccaggaatg
atgtcttcagtcatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcct
gccttaccgccaggagtaaataatatggatgtagcagcaggtacagcatctggtgcaaaa
tcaatgtggactgagcataagtcacctgatggaaggacttactactacaatactgaaaca
aaacagtctacttgggagaaaccggatgatctgaaaacacctgctgagcaacttttatct
aagtgtccctggaaggaatacaaatctgattctggaaagccttactattataattctcaa
acaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggataccagaat
accattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaa
gaaagtagtaagcaagaagagtgcactacaacatcagcagccccggttcctacaacagaa
attccgaccaccatgagcaccatggctgctgcagaagctgccgctgctgttgttgctgct
gcagccgccgccgctgccgctgctgctgctgccaacgccagtgcttccacctctgcttcg
aatactgtgggtggaactggtccagttgttcctgagcctgaagttacttcaattgttgct
accgttgtagataacgagaatacagtgacaatttcaactgaagaacaagcacaacttact
agtactccagctgttcaggaacagagcatggaagtatccagtaatactggagatgaaaca
gctaagcaggaaaccgtagctgattttactcccaaaaaagaagaggaggaaagccaacca
gcaaagaaaacctatacctggaatacaaaggaagaggcaaagcaagcatttaaagaatta
ttgaaagaaaagcgggtaccatctaatgcttcatgggaacaagctatgaaaatgatcatt
aatgatccacgatacagtgctttagcaaagttgagcgaaaaaaagcaagccttcaatgct
tataaagtccagacagaaaaagaagaaaaagaagaagcaaggtcaaaatacaaagaggct
aaagaatcctttcaacgttttcttgagaatcatgagaaaatgacttctacaaccagatac
aaaaaagctgagcaaatgtttggagagatggaagtctggaatgcaatatcggaacgtgat
cgtcttgaaatctatgaagatgttttattcttcctttcaaaaaaagaaaaggagcaagca
aagcagttacggaagagaaattgggaagccttaaaaaacatacttgacaatatggctaat
gtaacatactctaccacctggtctgaagcccaacagtatctgatggataatccaactttt
gcagaagatgaggaattgcagaacatggataaagaagatgctttaatttgctttgaagaa
cacatccgagctttagaaaaggaagaagaagaagaaaagcagaagagtttgctgagagaa
aggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaactgcacgaa
catggacaactacattctatgtcatcttggatggaattgtatccaacaattagttccgac
attagatttactaatatgcttggtcaaccgggatcaactgcacttgaccttttcaagttt
tatgttgaggatcttaaagcacgttatcatgatgagaagaaaataataaaagacattcta
aaggataaaggatttgtagtcgaagttaatactacttttgaagactttgtggccataatc
agttcaactaaaaggtcaaccacattagatgccggaaatattaagttggctttcaacagt
ttactagaaaaggcagaagcccgtgaacgcgaacgagaaaaagaggaggctcggaaaatg
aaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcctccaatagaattg
gatgctgtctgggaagatatccgggagagatttgtaaaagagccagcatttgaggacata
actctagagtcggaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaa
tgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaacatcacagg
aaacggtcccgctctagatcggggtcagattcagatgatgatgacagccattcaaagaaa
aaaagacagcgatcagagtctcggtctgcctcagaacactcttctagtgctgagtccgag
agaagttataagaagtcaaaaaaacataagaagaaaagcaagaagaggagacataaatct
gattctccagagtcagatgctgaacgagagaaggataaaaaagaaaaagaccgagaaagt
gaaaaagatagaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaagact
ggaaaggattctgggaattgggatacttctggcagtgaactaagtgaaggggaattggaa
aagcgcagaaggacccttttggagcaactggatgatgatcaataa
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