Mustela nigripes (black-footed ferret): 132013945
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Entry
132013945 CDS
T09425
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnp03041
]
132013945 (DDX18)
03009 Ribosome biogenesis [BR:
mnp03009
]
132013945 (DDX18)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132013945 (DDX18)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132013945 (DDX18)
Ribosome biogenesis [BR:
mnp03009
]
Eukaryotic type
90S particles
Helicases
132013945 (DDX18)
Pre-60S particles
132013945 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
132013945
NCBI-ProteinID:
XP_059250404
LinkDB
All DBs
Position
3:100808072..100824767
Genome browser
AA seq
669 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGFSDVSISETQNVDISEEPVGSGKVKKSLKQS
VNVGSSEAQNGERTKETVETVQVKKKKKKSTIKINGEAATQPPNSEPKKKKKKKRKMVDD
AGPDTKKVKTEDKGDSEEGAQAPEGTENSVEKPDDQEEDNEVPSLPLGLTGAFEDTSFAS
LTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELI
VKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTYHVHTYGLIMGGSNRSAEAQKLGNG
INIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM
LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK
KNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILLC
TDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYL
KQSKVPLSEFQFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNV
NNLNLPQVALSFGFKVPPFVDLNVNSNDGKLKKRGGGGGFGYQKAKKVEKSKIFKHISKK
SSDSRQFSH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatctacccatgaaactcctgcgcaagaagatcgagaaacggaacctcaaattg
cgccagcgaaacttaaagcttcagggattctcggatgtgagcatatcagaaacgcaaaat
gtggatatatctgaagaaccagtgggaagtgggaaggttaaaaaatccctgaaacagtct
gtgaatgtgggctcctcagaagcccagaatggagagagaaccaaagaaacagtggaaact
gtacaagttaaaaaaaaaaaaaagaaatctaccataaaaatcaatggagaagcagcaaca
cagcctcccaattcagaaccgaaaaagaagaaaaagaaaaagagaaaaatggtggatgat
gctgggcctgataccaaaaaagtgaaaactgaagacaaaggggactctgaagaaggggcc
caagctcctgaaggaacagaaaacagtgtggagaagccagatgatcaggaagaggacaat
gaagtgcccagcctacccctaggactgacaggcgcttttgaggatacttcatttgcttct
cttactgatcttgtcaatgagaacactctcagggcaataaaagaaatgggttttacaaac
atgactgaaattcagcataaaagtatcagaccacttctggaaggcagggatcttctagca
gctgcaaaaacaggcagtggtaaaacgctggcatttctcatccctgcagtcgaactcatt
gtcaagttaaagttcatgcctaggaatggaacgggagttcttatcctctcacctactagg
gaactggccatgcagactttcggtgttcttaaggagctaatgacgtaccatgttcacaca
tacggcttgataatgggtggcagcaacaggtcggctgaagcacagaaactcggtaatggg
atcaacatcatcgtggccaccccaggccgcctcctagaccacatgcagaataccccaggg
tttatgtataaaaatctgcagtgtctggttattgacgaggctgatcgtatcttagatgtt
gggtttgaagaggaattaaaacaaattattaaacttctgccaacacgcaggcaaaccatg
ctcttttctgccacacaaactcgaaaagttgaggacttggcaaggatttctttgaaaaag
gagccattgtatgttggtgttgatgacgataaagctaatgcaacagtggatggtcttgag
cagggctatgttgtttgtccctcggaaaagagattcctcctactttttacattccttaag
aagaaccggaagaagaaactgatggtcttcttttcatcctgtaagtccgtgaaataccac
tatgagttgctgaactacatcgatttacctgtcttggccattcatggaaggcagaagcaa
aataagcgtacaaccacattcttccagttttgcaacgcagattcagggatattgttatgt
actgacgtggcagcgagagggctggatattcctgaagtcgactggattgttcagtatgac
cctccagatgaccccaaggaatatattcatcgtgtaggaagaacagccagaggcctaaac
gggagagggcatgccttgctcattttacgccctgaagaattgggtttccttcgttacttg
aagcaatccaaggttccattaagtgaatttcagttttcctggtccaaaatttctgacatt
cagtctcagcttgaaaaattgattgaaaagaactactttcttcataagtcagcccaggaa
gcatataagtcctacattcgagcatatgattcccactctctgaaacagatcttcaatgtt
aataacttaaatttgcctcaggttgctctttcttttggtttcaaggtgcctccttttgtt
gatctgaacgtgaacagcaatgacggcaagcttaaaaagagaggaggcggtggtggcttc
ggctaccagaaagccaaaaaagtcgagaagtccaaaatcttcaaacacattagcaagaag
tcctctgacagccggcagttctcccactga
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