KEGG   Mustela nigripes (black-footed ferret): 132013993
Entry
132013993         CDS       T09425                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132013993 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnp03019]
    132013993 (WDR33)
Messenger RNA biogenesis [BR:mnp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     132013993 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Collagen WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 132013993
NCBI-ProteinID: XP_059250516
LinkDB
Position
3:113632671..113754984
AA seq 1336 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGMQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
AQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEENFDPSD
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDSYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGTSRGGGRGR
NT seq 4011 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactattttataagcgacctgattttgcgcagcagcaagcaatgcaacag
ctcacctttgatggaaaacggatgaggaaagcagtaaaccgaaaaaccatagactataat
ccgtctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtaaagtgt
ccagtatttgttgttaggtggactccagaaggaagacggttggtcactggagcttctagt
ggagaattcaccttgtggaatggactcacgttcaattttgaaacaatattacaggctcat
gatagccctgtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctactcactgcatcacgtgaccacctctgtaaactttttgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtccgatggctctttgttattctggcat
gtgggggtagagaaggaagtgggtgggatggagatggcccacgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctcaggttcaaatgaccatactagcaaa
ttctggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacgattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaagaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaagaaaacacaagcagaa
attgagcaagaaatggccacattacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcgcagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccccagggacaaatggggccacaaggtcct
ccgctgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccaccccaggggttgccaaggcctcaggacatgcacgggccccaaggaatgcagaggcat
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcacataggccctcaa
ggcccacctggtccccagggtcacttgggtcctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatgggatgcaaggt
gggccagggtctcaagggatccagggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagaaaatcagggtcctgctccccaaggg
atgatgatgggccatccgcctcaagagatgcgaggacctcaccctccaagtggactgctg
ggacatggccctcaggagatgcgaggccctcaggagatgcgaggcatgcaggggcctcca
gcccaagggtccatgctgggccccccccaggaattgcgagggcctccaggctcacagggt
cagcaggggccgccccagggctctttggggcctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcaacagaaaacagctctgctaggtgatggaccccgggcccccttcaatcag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgactcacgc
ggccctccaaaccatcacatgggccccatgtcagagaggcggcatgagcagagcagcggc
cctgagcacgggcctgagagggggcctttccggggcagccaggactgcaggggtccccct
gataggcgtggccctcaccccgacttccctgatgacttcagcagaccagatgacttccat
ccggacaagcgctttggccaccgattacgtgaatttgaggggcgaggaggacctttacca
caagaagagaagtggaggcgtgggggccctgggcctccgtttccgcctgatcacagggaa
ttcagcgagggggatggccggggagcagcccggggccctccgggggcttgggaaggccgc
agacctggagatgaacgattcccccgggatcctgaggacccgcgttttcgagggcgcaga
gaagaaagctttagaagaggagcacccccaagacatgagggccgtgcccctcccagaggg
agggacagttttcctggtcctgaggactttggtccagaggagaattttgatccttctgat
gaagcagcccgaggaagagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttactccccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccaggtccaggtcatgaacatttccgtgatgctcctcgc
cctgatcatccccctcacgatggtcattccccagctagcagagaacgttcctcttctctc
cagggcatggacatggcatccttgccaccccgaaagcgtccctggcatgatgggccaggg
acctcagagcacagagaaatggaagccccagggggtccttctgaggatcgaggaggcaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatccgggcgttccagctccttg
gatggagaccaccatgacagctaccacagagatgaaccttttgggggccctccaggcagc
ggtactccttccagagggggccgaagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccaaggcgaggaacttcaaggggtggtggaaggggtaggtag

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