KEGG   Mustela nigripes (black-footed ferret): 132013994
Entry
132013994         CDS       T09425                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03020  RNA polymerase
mnp03420  Nucleotide excision repair
mnp05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132013994 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132013994 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    132013994 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnp03021]
    132013994 (POLR2D)
   03400 DNA repair and recombination proteins [BR:mnp03400]
    132013994 (POLR2D)
Transcription machinery [BR:mnp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132013994 (POLR2D)
DNA repair and recombination proteins [BR:mnp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132013994 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 132013994
NCBI-ProteinID: XP_059250522
LinkDB
Position
3:113609349..113619203
AA seq 123 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPRLVL
SLC
NT seq 372 nt   +upstreamnt  +downstreamnt
atggctgccggtgggagcgacccacgggccggcgacgtagaggaggatgcctcacagctt
atcttccccaaagagtttgaaacagctgagacactgctaaattcagaggttcatatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggagctttctgaggtc
ttcatgaaaaccttaaattacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgtagcttgttgctccagaagaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggaatcaaaggcgctgatcccaaggttagtacta
tcactgtgctaa

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