Mustela nigripes (black-footed ferret): 132015823
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Entry
132015823 CDS
T09425
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132015823 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mnp01007
]
132015823 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnp03016
]
132015823 (GARS1)
03029 Mitochondrial biogenesis [BR:
mnp03029
]
132015823 (GARS1)
Enzymes [BR:
mnp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
132015823 (GARS1)
Amino acid related enzymes [BR:
mnp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132015823 (GARS1)
Transfer RNA biogenesis [BR:
mnp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132015823 (GARS1)
Mitochondrial biogenesis [BR:
mnp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132015823 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
DUF5915
Motif
Other DBs
NCBI-GeneID:
132015823
NCBI-ProteinID:
XP_059252616
LinkDB
All DBs
Position
4:complement(45611610..45655929)
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AA seq
739 aa
AA seq
DB search
MPPLRSALLRAASAALLLSLPSRLPARPPLPPCRPRSARAHAPTSFPAAASRSSMDGAGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKPLKEPKTVNVVQFEPNKGAIGKAYKKDAKLVLEYLAVCDECYITEMEKLLNEKGEF
TVETEGKTFQLTKDMVNVKRFQKTLHVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGVSHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSVVCDLANGSITWADVE
ARYPVFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccccctctgcgctcggcgctgcttagagccgccagcgccgcgctgctgctgtctctg
ccttcccggctcccggcccggcctccgctcccgccctgcagaccccgtagcgcgcgcgcc
cacgccccgacctcattccctgccgccgcctcccggagcagcatggacggcgccggggct
gaggaggtgctagcccctctcaggcttgccgtgcgccagcagggagatcttgttcgaaaa
ctgaaagaagataaagcaccccaggtagatgtagacaaagctgtagctgagctcaaagcc
cggaagagggttctggaagcaaaggagctagcattacaacccaaagatgacattgtagac
agagcaaaaatggaagataccctgaagaggaggtttttctacgatcaagcttttgctatt
tatggaggtgttagtggtctgtatgattttgggccagttgggtgtgctttgaagaacaat
attattcagacctggaggcagcactttattcaagaggaacagatcctggagattgattgt
accatgctcacccctgagccagttttaaagacttctggccacgtagacaaatttgctgac
ttcatggtgaaagatgtaaaaaatggagagtgttttcgtgctgaccatctattaaaagct
cacttacagaaattgatgtctgataagaagtgttctgctgagaagaaatcagagatggaa
agtgtcttggctcaacttgataactatggccagcaggaacttggggatctttttgtgaac
tataatgtaaaatcccccattactggaaatgatctctcccctccagtatcttttaactta
atgttcaaaaccttcattgggcctggaggaaacatgcctgggtacttgagaccagaaacc
gcacagggtattttcctgaatttcaagagacttttggagttcaaccaaggaaagttgcct
tttgctgctgcccagatcggaaattcttttagaaatgagatctcccctcgatctggactg
atcagagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgaaaag
gaccatcccaagtttcagaatgtggcagacctccacctttatttatattcagcaaaagcc
caagtcagcggacagtctgctcgaaaaatgcgtctaggagatgctgttgaacagggtgtg
attaacaactcagtattaggctacttcattggccgcatctacctctacctcacgaaggtt
ggagtatctccagataaactccgcttccgtcagcacatggagaacgagatggcccactat
gcctgtgactgttgggatgccgagtctaaaacatcctatggctggattgagattgtcgga
tgtgcagatcgttcctgttatgacctttcttgtcatgctcgagccaccaaagtcccactt
gtagctgagaaacctctgaaagagcccaaaacagtcaatgttgttcagtttgaacccaat
aagggagcaattggcaaggcgtataagaaggacgcaaagctagtgctggagtacctggct
gtttgtgatgagtgttacattacagaaatggagaaactactgaatgaaaaaggggaattc
actgttgaaactgaggggaaaacatttcagttgacaaaagacatggtcaacgtcaagaga
ttccagaaaacactacatgtggaagaagttgttccgaatgtaattgaaccctcctttggc
ctgggcaggattatgtatacagtatttgaacatacattccatgtacgtgagggagatgag
cagagaacgttcttcagtttccctgctgtagtagctccattcaaatgttcagtcctgcca
ctgagccaaaaccaggagttcatgccatttgtcaaggaattatcggaagccctgaccaga
aacggtgtctctcacaaagtcgacgactcctctgggtcgattggaagacggtacgccagg
actgatgagattggcgtggctttcggcatcaccattgacttcgatacagtgaacaagacc
ccccacacggcaactctgagggaccgagactccatgcggcagattagagcagaggtctcc
gaactgcccagtgtagtctgcgatctggccaacggcagcatcacgtgggctgacgtggag
gccaggtatcctgtctttgaagggcaagagactggtaaaaaagagacaatcgaagaatga
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