Mustela nigripes (black-footed ferret): 132015942
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Entry
132015942 CDS
T09425
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132015942 (VPS50)
Membrane trafficking [BR:
mnp04131
]
Protein recycling
Others
EARP complex
132015942 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
132015942
NCBI-ProteinID:
XP_059252823
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All DBs
Position
4:complement(70306279..70432063)
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AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDTPSASEG
SNMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVILTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccgacagggtctgaaaagccctccagaaagcctt
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaattaattaatagtattgaacaagta
tatttttctacggactcatttgatattgttaaatatgagctggagaaactccctcctgtt
ctcaatttgcaagaattagaggaatacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagctgatttaattcttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgccaaggaaggttttactcaagctagtttaggacttcttgcaaat
caaaggaaacgtcagttactgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagccgccagcacttttaaacattacagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgttgct
ctttccaaaatctgcaagaattttgacattaaccattacaccaaggttcagcaggcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcactcaagcc
attcataatactgtgtttcaagttgttcttggttatgtggagctatgttcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacccatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacagtgaagatactccttctgcttctgaaggg
agtaatatgggtactgaagaaactaattttgatcgtggctacataaaaaagaaattagaa
catggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctatttgcttgga
acagatttatctatatttaaatatgatgatttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgtggtagcaaatctgaagttttacaagagtccatt
agaaaacagagtgtcaattattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagtatcttg
caacttcatgaatttaaattcatggaacagtcacgttccccatcagtttcccctagtaag
cagccagcctcaacatcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccgtttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcctggcttct
aatgggtacgaatctgatgaacaagaaaaaagtgcttatcaggagtatgacagtgacagt
gatgttcctgaggaactgaaacgagattatgtggatgagcaaacaggtgatgcacctgtg
aaaagcgtttctagagaaactctaaaaagcaggaagaagtcagattatagtctaaataaa
gtgaatgcacccatcttaacaaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtctcag
ctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcactggaa
tcaacaggactgggccttagtagtagtagattaagaacaactcttaacagaatacaagaa
agccttattgatatggaagtttcagctgatcctaccgccaccctcacagcagcagaagag
agaaaggagaaagtgccaagcccacacctcagtcacctggtgattttgacatctggggat
acgttgtatgggctggcggaaagagtggtagccacagaatccttggtattcttggctgaa
cagtttgagttccttcaaccccatctggatgctgtgatgcctgcagtcaaaaagcccttt
cttcagcagttttactctcagacagtctcgactgccagtgaactacgcaaaccaatttat
tggattgtagccggtaaagctatagattatgaacagatgctgctcctgatggctaatgtg
aagtgggacgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctgaag
gaatttgagcagtttaacaggaggttaaatgaggtttctaagagagttcggatacccctg
cctgtgtctaatatactttgggaacactgtatacggctggccaacagaactattgtcgaa
ggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttaatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacctattcctgataaagaa
tttgtggaaacctatattaaagcctactatctaaccgagaatgacatggaacgctggatc
aaagagcacagggagtattcaacgaagcagctgaccaatctggtaaatgtttgcctggga
tcccatatcaataagaaagcaagacaaaaacttctagctgctatagatgatatagacaga
cccaaaagataa
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