Mustela nigripes (black-footed ferret): 132016226
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Entry
132016226 CDS
T09425
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132016226 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132016226 (CSTF2T)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
132016226 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
132016226 (CSTF2T)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132016226
NCBI-ProteinID:
XP_059253410
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All DBs
Position
4:complement(119707320..119711041)
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AA seq
613 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGPGPVPGPGPGPGPGLGPGPNVLLNQQ
NPPPPQPQHMARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGPGPGALTPGGGMQPQVGM
PGVGPVPLERGQVQMSDPRAPIPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPR
GYLGPPHQGPPMHHASGHDSRGPSSHEMRGGPLADPRLLMGEPRGPMIDQRGLPMDGRGS
RDSRGLETRAMETEVLETRVMERRGMETCAMETRGMEARGIDGRGMEIRGPGPSSRGPMT
GGIQGPGPISMGAGGPQGPRQVSSISGVGNPGAGMQGAGIQGAGMQGAGIQGAGMQGAGI
QAVGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSIL
ILKEQIQKSTGAS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcgatggatcggtcgctgcgttccgtgttcgtg
ggcaacattccgtacgaggccaccgaggagcagctgaaggacattttctcggaggtgggt
tcggtggtcagcttccgactggtgtacgaccgcgagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagaccgcgctcagtgccatgcggaacctcaacgggcgc
gagttcagcggcagggcgctgcgggtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcctcgggcccgcggcgcccatcatcgactccccgtacggggaccccatcgac
cccgaggacgcgcccgagtccatcaccagggcggtcgccagcctgccgccggagcagatg
ttcgagctcatgaagcagatgaagctgtgcgtgcagaacagccaccaggaagcgcggaac
atgctgctgcagaacccgcagctggcctacgcgctgctgcaggctcaggtggtcatgagg
atcatggaccccgagatcgcgctgaagatcctgcaccgcaagatccatgtcacgccgctg
atcccgggcaaatcccagcctgtctccggccccggccccggccccggccccgtccctggc
cctggtcccggtcccggccccgggctgggccccggccccaatgttctgctcaaccagcag
aaccctccccccccacagcctcagcacatggccagaagacccgtcaaagacatccctcct
ctgatgcagacccctatccagggcgggattccggccccgggccccataccggccgcggtt
cccgggccggggccgggtgccttaacccctggtggaggaatgcagccccaggttggaatg
ccaggcgtcggtccagtgcctttagagcgggggcaggtgcagatgtcggatcctagagct
cctatacctcgtgggcccatgactgctgggggcctccctcctcgaggactgttgggagat
gctccaaacgacccacgtggagggactctgctttcagtcactggagaagtagagcccaga
ggctatcttggccctcctcatcagggcccccccatgcaccatgcctctggtcatgacagc
cggggcccttcctcacatgagatgaggggagggccgttagcagatcccagactgctgatg
ggagagcccaggggacccatgatagatcagagaggtctccctatggatggtagaggtagt
agagattctcgagggctggagactcgagccatggagactgaagtcttagagacacgagtg
atggagagaagaggaatggagacctgtgcgatggaaaccagagggatggaagcgagaggc
atagatggaagagggatggagatacggggtcctggccccagttccagaggccctatgact
ggtggaatccagggtcctgggcccattagtatgggggcaggtggtcctcagggacctaga
caggtctccagcatttccggggtgggaaatcctggagctggcatgcagggggcaggcata
caaggagcgggcatgcagggggcgggcatccaaggagcaggtatgcagggggcaggcata
caagcagtgggcatgcagggggcaggcaagcaaggtggaggccagcctagcagttttagt
cctgggcagagccaggtaactccacaggatcaagaaaaggcagctctgatcatgcaggtt
cttcaactgactgcagatcagatcgccatgctgccccctgagcaaaggcagagcatcctc
attttaaaggaacaaattcagaaatcgactggggcttcttga
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