Mustela nigripes (black-footed ferret): 132016261
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Entry
132016261 CDS
T09425
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
132016261 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132016261 (JMJD1C)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
132016261 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
132016261
NCBI-ProteinID:
XP_059253481
LinkDB
All DBs
Position
4:complement(130173751..130497568)
Genome browser
AA seq
2545 aa
AA seq
DB search
MAMAVETRLELVGKRFLCVAVGEEARPECRESGRCWRGWRAGVIRAVSHRDSRNPDLAVY
VEFDDLEWDKREWVKVYEDFSTFLVEYHLIWARRIDPSQTQGSKSKQIQWPALTFKPLVE
KSIPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKV
QEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMV
QMTFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQAAVPKQ
NTHQQQQQRNIRPSKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQLMNKRRKPEED
EKKLNMKRLRTDNVSDFSESSDSENSNKRMINNSSEQKPENELKNKNTSKINGEEGKSQN
NEKVGEETLIIDSQPPWDQIQEDKKHEEPEKQKSLDSQLQENMIIHSSEQATLSDHNPND
LLLQECSMEKTHTLELLPKEKFVSRPPTPKCVIDITNDTNSEKVAQEISSTFGLQTLQKM
DPNVNDSKHSIANAKYLETAKQDSDQSWVSDVVKVDLTQSNVRSVSSGNDHPNMEKEKNQ
YVSYMSSLSTVSVTEDKLHKRSPPPETVKSKLNTSADALKTKSNPSPEVIKPKITHSPDS
VKSKATYVNNQAAGERRLANKIEHELSRCSFHSVPTRGSTLEATKSPLIIDKNEHFTVYR
DPALVGSETGANHISPFLNQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLP
TINTHPLTSGPHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQ
LLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESS
LRRNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRSLKITAHSSPPLTKSLIDHHK
DELERKAFIEPLRSVASTSAKNDLDLNRSQTGKDGLLHRHFVDPVLNQLQRQPQETGERL
HKYKEEHRRILQESIDVAPFTTKVKGLEGERDNYSRVPLSSSSPKSHVILKQDKDVECSV
SDLYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNSVAVAANPQT
LTSFISSLSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTN
ALRSMPALHRAPVFHPPIHHSLERKESNYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIP
EPKDSQAHFKSSSEQSLSEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSRTKL
ESVPAMQSGSKDRVSERSSTGANQTDCLKPAEAGETGRIILPSVNSDSAHIKSEKNVQAV
SQGSVPSSVMSAVNTMCNTKTDVFTSAATTTSVSSWGGSEIIYSLSNTILASKSSECTSS
KSVSHSVAQIQECRVSTTAPVTPASSQTGSAAQPSSGFSGTTDFIHLKKHKAALAAAQYK
SSNVTETEPNAVKNQTSTTSPLLDSTVVCSTINKANSVGNGQASQTSQPNYHTKLKKAWL
TRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYVKDDKVSR
RKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDIEEDLKPNGVLS
RSAKEKSKLKLQSNNNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCREC
RLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYDD
DELDVETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLF
NIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLT
DLLDAMHTLREKYGIKSHCHCTNKQNIQVGNFPAMNGVSQVLQNVLNHSNKISLCMPESQ
QQNNPQKSESKGNSSPGSDESTDSKLTPPESQSPLHWLADLAEQKSREEKKENKEFALEK
QIKEEQEQDSPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSM
GTPSGKSGRTMPNILDDIIASVVENKIPPNKASKINVKPEPKEEPKESRKSPMEENKLYS
DIPHSWICEQHILWLKDYKNINNWKLFKECWKHGQPAVVSGVHKKMNISLWKAESISLDF
GDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKNGETVVLKLKDCPSGEDFKTMMP
ARYEDLLKSLPLPEYCSPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNL
HVEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYA
GKDIDKIREFLQKISKEQGIEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTWTLIQFLG
DAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNI
LYHAVKEMVRALKIHEDEVEDMEEN
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atggctatggcggtggagacgcgactggaactggtggggaagcggttcctgtgcgtggct
gtcggcgaggaggctcggcccgagtgccgagagagtggacgctgctggcggggctggcga
gcgggggtcatccgagctgtgtcacacagggacagccgcaatccggacctggcggtgtat
gtggaatttgatgatcttgaatgggataaacgagagtgggttaaagtatatgaagatttt
tcaactttcttggtggaataccacttaatctgggccagaaggatcgaccctagccagact
cagggatcaaagagcaaacagattcagtggcctgcattgactttcaaacccctggttgaa
aaaagtatacctagttcaatcactgcggtagaattccttgtagataaacaactggatttt
ttaactgaagatagtgcctttcaaccctaccaggacgacatagacagcttaaacccagtt
ctcagggacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggtt
caggagatttttatgcaaggtccttattccttaaatggctacagagtgagagtatataga
caagactctgccacccagtggtttactggcataattactcatcatgatctcttcactcgc
accatgatcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggtt
caaatgacctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcatt
acatcacggcgaaggtctcgtgccagtcaaaatagcaacactgttcacggtcattataca
cgtgcccaagcaaatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacag
aatacccaccagcaacagcaacaaagaaatattcgtccaagtaagaggaagggctcagat
agcagtataccagatgaagagaagatgaaggaggaaaagtatgattatatagcacgagga
gaaaatcctaaagggaaaaacaaacagttgatgaataaaagaaggaaacctgaggaggat
gaaaagaaactaaatatgaaaagattacgaaccgacaatgtttcagatttttctgagagc
agtgactcagaaaattcaaataagagaatgataaataattcctcagagcagaagccagag
aatgagttgaaaaataaaaacacttcaaagataaatggagaagaaggaaaatcccagaat
aatgagaaagtaggagaagagacactaataatagatagccagcctccctgggatcaaata
caggaagataaaaaacatgaagaaccagagaaacagaaatctcttgactctcagcttcaa
gaaaatatgattattcattcatcagagcaggccacactttctgatcataatcctaatgat
ttacttcttcaggaatgcagtatggaaaaaacacatacattggaattattaccaaaggag
aagtttgtatccagaccacccacaccaaaatgtgttattgatattacgaatgatactaat
tcagaaaaggtggctcaggaaatctcaagtacctttggccttcagacacttcagaaaatg
gatcctaatgttaacgattcaaaacattctatcgcaaatgcgaaatacttggaaacagca
aaacaagattctgatcagagctgggttagtgatgtagttaaagtagatttaacccaatca
aatgttagaagtgtttcctcaggaaatgatcacccgaatatggaaaaagagaaaaatcag
tatgtctcttacatgtcttctctaagtacagtttctgtcacagaagataagctacataaa
cgaagcccacccccagagacagtaaaatctaagcttaatacttcagcagatgctctcaag
acaaaatcaaatccctcacctgaagttattaaacccaaaattacccattctcctgattct
gtaaagtctaaggccacttatgtgaacaaccaagctgctggtgagagaagactagcaaat
aagatagaacatgaattatcaagatgcagttttcattcagttcctactcgaggcagtaca
ttggaagctacaaagagcccgcttattattgataaaaatgagcatttcacagtttacaga
gatcctgcacttgttgggtcagaaacaggagctaatcacatttcacctttcttaaaccag
catccctttcctcttcattcttcatcccatagaacctgtttaaatccgggtacccatcac
cctgccttaactcctgcccctcacttacttgctggatcatccagtcaaactccattacct
accattaacacacaccctctgactagtggtccacaccattctgttcatcaccctcattta
cttcctgccgtgttacctggagtgcctactgcctccctacttggtggccacccacgacta
gagactgcacatgccagcagcttgagccacttagcattagcacaccagcaacagcaacag
ttgttacagcaccagtcacctcatcttcttggacaagcccatccttctgcttcatataat
cagcttggactttatccaattatttggcaatatccaaatggaacacatgcatactcagga
cttggtctaccttcttcaaagtgggttcacccagaaaatgcagttaatgctgaatcttca
ttaaggaggaattctcccagtccttggttacatcaacccacccctgtgacttcagcagat
ggtattggattacttagtcacattcctgtcagaccttccagtgcagagcctcatcggtct
cttaaaattacagcacattccagtccaccattgacaaaaagtttaatagatcaccataaa
gatgaattggagaggaaagcttttattgaacctttacgttctgttgcatccacatcagcg
aaaaatgacttggatctaaatagatcacagactggaaaagatggtttattgcacagacat
tttgtggatcctgtactgaatcaattacagagacaaccccaggaaactggagagagatta
cacaaatataaggaggaacatcgtcgaatccttcaagaaagtattgatgttgctcccttt
acaactaaagtcaaggggcttgagggtgagagggataattattccagagtaccattgtca
tcttctagccctaaaagccatgtcatcctcaaacaagacaaagatgtagaatgttcagta
tcagatctttataaaatgaagcactcagtgcctcagagtttgccccaaagtaactatttc
actacattatctaatagtgtggtcaatgaaccaccacggtcatatccatccaaagaggtt
tcaaatatttacactgaaaaacagagtaattctgttgcagtagcagctaatcctcaaact
ctgacttcatttatttcatctctttcaaagcctccacctttaattaaacaccaaccagaa
agtgaaggtttagtaggcaagataccagaacatcttccccatcaaattgcttctcactca
gtaaccactttcagaaatgattgtaggagtcctacccatttgacagtttcttctacaaat
gcactccggagcatgcctgctttgcacagagcaccagtatttcatccaccaatccatcac
agcctggaaagaaaggaaagcaactatagtagtctttcccctccaactttaaccccagtc
atgcctgtaaatgctggtgggaaagttcaagaatcacaaaagcctccaactctaattcca
gagccgaaagactctcaggcacattttaagagttcttctgaacaaagtttgtcagaaatg
tggaaatctaataataacctcagtaaagagaaagctgaatggcatgtagagaaaagcagt
ggaaagtcacaggctgctatggcatctgtcattgtacgtccaccatctcgtacaaaactt
gagagtgtgccagcaatgcagtcaggttccaaagatcgagttagtgaaagatcttcaact
ggggcaaaccaaacagattgcctcaaaccagcagaagctggagagactggaagaatcatt
ctgccaagtgtgaattcagacagtgctcacataaaatctgaaaaaaatgtccaggctgtc
tcacagggcagtgttcccagttcagtcatgtctgctgtaaatacaatgtgtaataccaaa
acggatgtattcacatctgctgccactaccactagtgtttccagctggggtggttcagaa
ataatttattctttatcaaataccattttggcctctaaatcctcagaatgtacctcttca
aaaagtgtcagtcattcagtggctcaaatacaagaatgcagggtcagcaccacagctcca
gttacaccagccagtagtcagacaggaagtgctgctcagcccagttctgggttctcaggc
acaactgattttatccatttaaaaaagcacaaggcagcattggctgcagctcagtataaa
agtagtaatgtcactgagactgaacctaatgctgtgaaaaatcagacatctacaacctcc
cctcttttggatagcactgtagtctgtagtacaataaacaaagcaaactctgtaggaaat
gggcaagcatcccagacaagtcaacctaactaccatactaagctgaaaaaggcctggctt
actagacactcagaggaagataaaaatactaataaaatggaaaattcagggaattctgta
tcagaaattattaagccatgttctgtcaatttaatagcctctacatctaatgatatacaa
aatagtgtagatagtaagatcatagttgataaatatgtaaaagatgataaagtcagtagg
agaaaagccaaaagaacttacgaatctggctctgaaagtggagactcagatgaaagtgaa
agcaagtcagagcagaggactaagaggcaacctaagccaacttacaaaaagaagcaaaat
gatttgcagaagaaaaaaggtgacatagaagaagatttaaaacccaatggggtcctcagc
aggagtgccaaagaaaaaagtaaactgaaattgcagagcaacaataatagtgctggtatc
cctcgttcagtattaaaagattggcgtaaagtcaagaagctgaagcaaactggggaatcc
tttttacaggatgactcctgctgtgagatagggcctaatttgcaaaagtgccgggaatgt
agacttattcggagtaaaaaaggagaagaaccaactcattcaccagtgttttgtagattt
tactactttagacgattgtcatttagtaaaaatggagtggttagaatagatggtttttct
tctcctgaccaatatgatgatgaagctatgagcttatggacacatgaaaattacgatgat
gatgaactagatgtagaaacttcaaaatacatcttggatatcataggtgataagttctgt
cagttagtaacatcggaaaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcc
tggaaaagagcagtgagaggagtccgggaaatgtgtgacgcatgtgaagcaacattgttt
aacattcattgggtctgccaaaaatgtggatttgtggtctgcttagattgttacaaggca
aaggaaaggaagagttctagagataaagaactgtatgcttggatgaagtgtgtgaaggga
cagcctcatgatcacaaacatttaatgccaactcaaattatacccggttctgttttgaca
gatcttctagatgcaatgcacactcttagagaaaaatacggtattaaatcccattgtcat
tgcactaacaaacaaaatatacaagttggaaattttcctgcaatgaatggtgtatctcaa
gttttacagaatgttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcag
cagcaaaataaccctcagaagtctgagagtaaaggcaacagcagcccagggagtgacgaa
agcacagacagcaagttaactcctccagaatcccagtcaccgctgcattggttagcagat
cttgcagagcaaaagtccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaag
caaattaaagaagagcaagaacaagacagccctgattctccaaatagcagaacatcacct
cctgtgtcccagaataatgagcaaggctcaactctacgagatttgctgaccacaaccgct
ggcaagctacgtgtgggttctacagatgctgggattgcctttgccccagtgtattcaatg
ggaaccccaagtggtaaaagtggaaggaccatgccaaacattcttgatgacataattgct
tcagttgttgaaaacaaaattccaccaaataaagcctctaaaataaatgtaaaaccggag
ccaaaagaagagcctaaagagagcagaaaatcacccatggaggaaaacaaattatatagt
gatataccacattcctggatctgtgagcagcatattctgtggcttaaagattataaaaat
attaataattggaagcttttcaaagagtgttggaaacatggacaacctgcagtggtttct
ggtgtgcataagaaaatgaacattagcttgtggaaggcggagtcaattagtcttgatttt
ggagaccaccaagctgatctcctgaactgcaaagacagcattatttcaaatgccaatgtt
aaggaattctgggatggttttgaagaagtttcaaaacgacaaaaaacgaaaaatggagaa
acagttgttttaaaactgaaagattgcccttcaggagaagacttcaagactatgatgcca
gcaagatacgaagatcttttaaaaagcctaccattgccagaatattgtagtccagaagga
aaattcaacttggcctctcatttgccaggattttttgtacgccctgatctaggacccagg
ttgtgcagtgcctatggtgtagcggctgctaaagatcatgacataggaacaacaaatctc
cacgttgaagtttctgatgttgtcaatattctagtctatgttggcatagcaaaaggaaat
ggcattctctcaaaagcaggaatactcaagaaatttgaggaggaagatttggatgacatt
ttaagaaaacgattgaaggactcaagtgaaatacctggtgctctgtggcatatttatgca
gggaaagacattgacaagataagggaatttcttcagaagatttcaaaagaacaaggcatt
gaagttctcccagaacatgatccaatacgtgaccaaagttggtacgtgaacaaaaagctg
cgccagagacttcttgaggagtatggagttaggacctggactctcattcagttccttggt
gacgccattgttttaccagcaggagcccttcatcaggtacagaattttcacagctgtatt
caggtaactgaagactttgtgtctccagaacatcttgtacagtcatttcacttaacacag
gaactgagacttttgaaggaggaaatcaattatgatgataaactacaggttaaaaatata
ttgtatcatgcagtcaaggaaatggtgagagctttgaagatacatgaagatgaagtagag
gacatggaagaaaattag
DBGET
integrated database retrieval system
