Mustela nigripes (black-footed ferret): 132016353
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Entry
132016353 CDS
T09425
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnp03009
]
132016353 (DDX21)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132016353 (DDX21)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132016353 (DDX21)
Ribosome biogenesis [BR:
mnp03009
]
Eukaryotic type
Pre-60S particles
Helicases
132016353 (DDX21)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132016353 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132016353
NCBI-ProteinID:
XP_059253571
LinkDB
All DBs
Position
4:135551782..135576615
Genome browser
AA seq
792 aa
AA seq
DB search
MPGKLLSDADLDSDTAMEKVEVPRKQKGKKEKPKSNKTEEATEVKEEIISPKAKKVKKKA
ESNEVDLSSPKSKKAKKKEEPSQDNMISPKTNRSVKKPKETTEKKVVSPKIKKAVKNEEP
SEEEIVAPKPKKMKKEKEMNGEIREKSPKLKNGFPHSGPISNSSETPGEESNSEVEQEVP
VEQKEGAFSNFPISEQTIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSF
AIPLVEKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPYGG
QIERMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVA
YKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHW
TQRAAVIGDVIRVYSGFQGRTIIFCETKKEAQELSQNVAIKQDAQSLHGDIPQKQREITL
KGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICF
YQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEK
LIEEKGAVEALAAALAHISGATSVDQRSLINSDAGFVTMILRCSIEMPNISYAWKELKEQ
LSEDIDSKVKGMVFLKGKQGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPREG
YRSFRGQREGSRGFRGQREGSRFRGQREGNRNFRGQREGNRGFRGQRSGGGNKSNRSQNK
GQKRSFSKAFGQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaaactcctcagtgacgcggacttggactcagacacggccatggaaaaagtg
gaggtaccgcgaaagcagaaaggtaaaaaagagaagccaaaatctaataagactgaagag
gcaacagaagtaaaggaagaaattatttcccccaaagctaaaaaagttaaaaagaaagcc
gagtctaatgaggttgacttgagttctcctaaatccaaaaaggcaaaaaagaaagaggag
ccatctcaggataacatgatttctcctaaaaccaacagaagtgtgaaaaaaccaaaggag
actaccgaaaagaaagttgtttctcctaaaatcaaaaaggcagtaaaaaatgaagaacct
tctgaagaagaaatagttgctcctaagcccaagaagatgaagaaagaaaaggaaatgaat
ggagaaattagagagaaaagccccaaactgaagaatggattccctcattctggacccatc
tccaactccagtgaaaccccaggggaagaaagtaacagtgaagtagagcaggaagtacct
gtggaacaaaaagaaggagctttctctaattttcccatatctgaacagactattaaactt
ctcaaagcccgtggggtgaccttcctgtttcctatacaagcaaagacatttcaccatgtc
tatagtggaaaagacttaattgcacaggcacggacaggaactgggaagacattctctttt
gccatccctttggttgagaagcttcagggagaactgcaagaccggaaaagaggccgtgcc
cctcaggtgctggttcttgcacccacaagggagttggcaaatcaagtaagcagagacttc
agtgacatcacaagaaagctggcagtggcttgtttttatggtggaactccctatggaggt
cagattgaacgcatgcggaatgggattgatatcctggttgggaccccaggtcgaatcaaa
gaccacctacagaatggcaagctggatctcaccaaacttaagcatgttgtcctggatgaa
gttgaccagatgctggatatggggtttgctgatcaagtggaagagattttaagtgtggca
tacaagaaagattcagaagacaatccccaaacattgcttttttctgccacttgccctcat
tgggtatataatgttgctaagaaatacatgaaatctacatacgaacaggtggacctgatt
ggtaaaaagacccagaaaacggcaataactgtggagcatctggctattaagtgccactgg
actcaaagggcagcagttattggggacgtgatccgagtatatagtggttttcaggggcgc
actatcatcttctgtgaaaccaagaaagaagcccaggagttgtcacagaatgtggccata
aagcaggatgcccagtcattacatggagatattcctcagaagcagagagaaatcactttg
aaaggctttagaaatggtgattttggagttctggttgcaaccaatgttgccgctcgcggg
ttagacatccctgaggttgatctggttgtacagagctctccaccaaaggacgtggagtcc
tacattcatcgttctgggaggacaggaagagctggaaggacggggatttgcatctgcttt
tatcagcacaaggaagaatatcagttagcacaagtggagcaaaaagcgggaattaaattt
aagcgaataggggttccttctgcaacagagataataaaagcttccagcaaagatgccatc
aggcttttggattctgtgcctcccactgccatcagtcacttcaagcaatcagcagagaaa
ctgatagaggagaagggagctgtggaagccttggcagcagctctggcccatatttcagga
gccacatcggtagaccagcgctctctgatcaactcagacgcaggctttgtgaccatgatc
ttacgatgctcaattgaaatgccaaacattagttatgcttggaaagagcttaaagagcag
ctgagtgaggatattgattccaaagtgaaaggaatggtttttctcaaaggaaagcagggt
gtttgctttgatgtccctactgcagcagtaacagaaatacaggaaaaatggcatgattca
cggcgctggcagctctcagtggccacggaacagccagagctggaaggaccacgggaagga
tatcgaagcttccgagggcagcgagaaggcagtcgagggttccggggacagcgggaaggc
agtcgctttagaggacagcgagaaggaaacagaaacttcaggggacagcgggaaggaaat
cgaggcttcagaggacagcgatcaggaggtggcaacaaaagtaacagatcccaaaacaag
ggccagaagcggagtttcagtaaagcattcggacagtaa
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