Mustela nigripes (black-footed ferret): 132016716
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Entry
132016716 CDS
T09425
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03410
Base excision repair
mnp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132016716 (POLL)
03450 Non-homologous end-joining
132016716 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132016716 (POLL)
Enzymes [BR:
mnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132016716 (POLL)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
132016716 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
132016716 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
NTP_transf_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
132016716
NCBI-ProteinID:
XP_059254378
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All DBs
Position
4:complement(165271019..165279583)
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AA seq
576 aa
AA seq
DB search
MDPGGILKAFPKRRKIHASPSSKALVKKPKQEGGEEAGEWLSSLRAHVVPSGIGRARAEL
FEKQITQYGGQICAAQAPGVTHIVVDEGMDCERVLRLLRLPQLPQGAQLVKSTWLSLCLQ
EKRLVDTAGFNIYIPNSRYLDQPQLSKADQDSSVPPGAQEAVLRTALSPPRPPTRPVSPP
WRTEEAPSTQAQPGCDDETSDGEETQVSAADLEALISGHCSPSLEGDAEPSPAPKGLDKW
VCAQPSSQKAVNYNPHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEA
FSIPGIGKRMAEKIVEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRT
LEDIRDQASLTSQQAIGLKHYEDFLERIPREEATEIEQTVREAAQAFSPGLLCVACGSYR
RGKASCGDVDVLLTHPDGRSHQGIFNPLLDSLRRQGFLTDDLVSQEENGQQQKYLGVCQL
PGPGRRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTSVVRD
THGLKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgggggcatcttgaaggcatttcccaagcggaggaaaattcatgccagtcca
tcatcaaaagcacttgtaaagaaacccaagcaagaaggtggagaagaagcaggagagtgg
ctgagctccctgcgggcccatgttgtgcccagcggcattgggcgagcccgggcagaactc
tttgagaagcagattactcagtatggaggccagatatgcgctgcccaggccccaggggtc
actcacattgtggtggatgaaggcatggactgtgagcgagtcctccgtctccttcgactg
ccccagctaccccagggtgctcagctggtgaagtccacctggctgagcctgtgcctgcag
gagaaaaggctagtggacacggcaggattcaacatctacatccccaacagcaggtacctg
gaccaaccacagctcagcaaggcagaccaagactcttctgtgcctcctggagcccaggag
gctgtgctcaggacagccctctctcctcctcgccctcccaccaggcctgtatctcctccc
tggaggacagaggaggccccgagcacccaagcccagcctggctgtgatgatgaaaccagt
gacggggaagagacacaggttagcgcagctgatctggaagcccttatcagtggccactgc
tccccctccctcgagggagatgccgagcctagtccagcccctaagggcctggataaatgg
gtctgtgcacagccttcgagccagaaggcggtcaactacaacccccacatcacagagaag
ctggaagtgcttgccaaagcctacagtgttcaaggagacaagtggagggccctgggctat
gccaaggccatcaatgccctcaagagcttccacaagcctgtcacctcataccaggaggcc
ttcagtatccccgggattggaaagcgaatggccgagaagatcgtagaaatcctggagagt
gggcatctgcggaagctggaccatatcagtgagagcgtgcctgtcttggagctcttctcc
aacatctggggagctggaaccaaaactgcacagatgtggtaccaacagggtttccggacg
ctagaagatatccgcgaccaggcctccctgactagccagcaggccattggcctgaagcat
tatgaggacttcctggagcgcataccccgggaggaggctacagagattgagcagacagtc
cgggaagcggctcaggccttcagccctgggctgctgtgtgtggcatgtggttcttaccgc
cgggggaaggcaagctgtggggacgtggacgtgctgctcacccacccggacggccggtct
caccagggcatcttcaatcctctcctcgacagccttcggcgccaagggttcctgacagat
gacctggtgagccaggaggagaacggccagcagcagaagtacctgggggtgtgccagctc
cccgggccgggacggcggcaccgacggctggacatcatcatcgtgccctacagcgagttc
gcctgtgccctgctctacttcactggctctgcccacttcaaccgctccatgcgggctctg
gccaagaccaagggcatgagcttgtcagagcatgccctcagcacctctgtggtccgggac
acccacggcctcaaggtggggcctggccgagtgctgcccacccccacagagaaggatgtc
ttcaggcttttaggcctaccctaccgagaaccagccgagcgtgactggtga
DBGET
integrated database retrieval system
