Mustela nigripes (black-footed ferret): 132016756
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Entry
132016756 CDS
T09425
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04382
Cornified envelope formation
mnp04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132016756 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
132016756 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
132016756
NCBI-ProteinID:
XP_059254489
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All DBs
Position
4:complement(167396014..167480219)
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AA seq
1500 aa
AA seq
DB search
MTNPGGYGMDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRL
EKHSLTHGSSGYINSSGSTRGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEG
SSSGNSSPEYPRKELASSSTRGRSQTRESEIRVRLQSASPSTQWTELDDVKRLLKGSRSA
SVSPTRNSSNTLPIPKKGTVETKMVTASSQSVSGTYDATILDANLPSHVWSSTLPAGSSM
GTYHNNVTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGVSTCSSVFGMQNNLAPSS
SALSHGTATTSTAYGVKKNLPQSPGVVSTGVSTSAACTTNVQSDDVLHKDCKFLILEKDN
TPAKKEMELLIMTKDSGKVFTASPASIAATSFSDDTLKKEKQAAYTADTCLVSEANGDVK
TVSTKGKAASADMHNYNHRVGGGGGGGGGGPWGAAPAWCPCGSCCSWWKWLLGLLLTWLL
LLGLLFGLIALAEEVRALKARVAALEQGRGDVLLYDQKMDRASKDRLLGTAPRVGADAGG
LGLDHHSQEVLWLFVRDKLKAEQESGNLRGSPGPKGDMGSQGPKGDRGLPGTPGLPGLLG
HPGPEGPKGQKGSVGEPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGAAGEPGVQGP
PGVPGSVGPKGSSGSPGPRGVPGPVGPQGLRGEVGLPGIKGDKGPLGSPGPKGDQGEKGP
RGLTGEPGLRGLPGAVGEPGAKGAVGPAGPDGHQGPRGEQGLMGMPGTRGPQGPSGDPGK
PGLTGPQGPQGLPGTPGRPGAKGEPGAPGRIVTSEGSSTITVPGPPGPPGAMGPPGPPGA
PGPVGPAGLPGQQGPRGERGLTGESFMGSSSSIAEVLSTQGLDLRGPPGPPGPPGPPGPS
IPGPPGPRGPAGEGLPGPPGPPGSLLTNSETFFSGPPGPPGPPGPKGDQGPPGPRGHQGE
QGLPGFSTSGSSSLGLNLQGPPGPRGPKGDKGDPGVPGAPGIPGGLSQGGSSSSTMFVPG
PPGPPGPPGPPGSISSSGREIQQYISEYMQSDSIRAYLSGVQGPPGPPGPPGPVTTIAGE
TFDYSELASRVGSYLQTSGYSISSSTSISSEDIVAVLKRDDVRQYLRQYLVGDWSLQSLD
YAELSSRVLSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLQGSEYRGIIGPPGPPGPP
GIPGNVWSSISVEDLSSYLHTAGVSSIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSF
RSELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLVSMDGSYSRGSRSSSHSASVSRGSS
YSSSMGIGGSSGGSLGEGGAFGLDMGLDRGYGGAAEGGMYGGEGGLFGAGFAGGLDYNEL
AVRVSESLQRQGLLQGMAYTVQGPPGQPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAI
PGPPGQKGEVGTQGPKGERGPAGPPGRPGPPGPRGHKGEKGDKGDQVYVGRRKRSVGIKP
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccaggtggctatggtatggatgtaaccaagaaaaacaagcgagatggcacc
gaagtcactgaaagaattatcacggaaacagtaactacaagacttacatccttacctcca
aaagggggaaccagcaacggctatgctaaaacgggctctctgggtggagggagccggctg
gagaagcacagcctgacccatggcagcagtggctacataaactcaagtgggagcacgcga
ggcaatgcctccacgtccagttacaggagggctcactcccccgcctccactctgcccaac
tcacctggctccaccttcgaaaggaaaacgcacatcactcggcatggaacatacgaaggg
agctccagtggcaactcttccccagagtaccctcggaaggaactcgcatcttcttcaacc
agaggaaggagccagacacgagaaagcgaaatccgggttcgactgcagagcgcgtcccca
tctacccaatggacagaattggatgatgttaagcgtttgctcaaggggagccgatcagca
agcgtgagccccacccggaactcctccaacaccctcccgatccctaagaaaggcacagtg
gagaccaaaatggtgacagcaagctcccagtcggtgtccggcacctatgatgccaccatc
ttggacgccaaccttccctcccacgtgtggtcttccaccttgccggcggggtcctccatg
gggacctaccacaacaacgtgacaacccagagctcatccctcctcaataccaacgcctat
tctgcgggatcggtcttcggagttccaaataacatggcatcctgctctcccacgctgcac
cccggggtcagcacctgctcctcagtgtttggcatgcagaacaacctggcacccagctcg
tccgccctgtcccacggcacggccaccacctccacagcgtacggtgtgaagaagaacctg
ccccagagccctggtgttgtgagcactggtgtgtccacctctgcggcctgcaccacaaat
gtccagagtgatgatgtcctgcacaaggactgtaaattcctgattctggagaaagacaac
acgccagccaagaaggagatggagctgctgatcatgaccaaggacagcgggaaggtcttc
actgcctccccagccagcatcgctgcaacgtctttttcagatgacaccctcaagaaagag
aagcaagctgcctacacggctgacacctgcctggtatcagaagctaatggagacgtgaag
actgtgtccaccaagggcaaggccgcctccgcagatatgcacaactacaaccaccgtgtg
ggtggcgggggcggcgggggcggtgggggcccgtggggggcggcgcccgcctggtgcccc
tgcggttcctgctgcagctggtggaagtggctgctgggcctgttgctcacctggctgctg
ctcctggggctgctcttcggcctcatcgctctggctgaggaggtgcgggcgttgaaggct
cgggtggccgcgctggagcagggccggggcgacgtcctgctctacgaccagaagatggat
cgcgccagtaaggaccggctgctgggcactgccccccgcgtgggagcagatgccgggggc
ctggggcttgatcaccacagtcaggaggtgctctggctgttcgtgagggacaagctgaag
gctgagcaggaaagcggaaatctccgaggaagccccggcccgaaaggtgacatgggaagt
caaggccctaaaggcgaccgagggctccctgggactccaggcctccctgggctcctgggc
catccgggtccagaaggaccaaagggacaaaaaggcagtgtgggagagccaggcatggag
ggacccatgggccagagagggcgagaaggccccatgggacctcgtggtgaaccagggcct
cctgggtttggagagaaaggtgacagaggggctgctggtgaacctggtgttcagggccca
cctggcgtcccaggttctgtgggtcccaaaggttccagcggttctcctggcccacggggt
gtcccaggcccagtaggtccccaagggctccgaggggaagttggacttcctggtatcaaa
ggtgacaaaggacctctggggtcaccaggacccaaaggtgaccagggagagaaaggaccc
cgaggcctcacaggtgagccgggcttgagaggcctgcctggtgctgtgggtgagcccgga
gccaaaggagcagtcggacccgctggccccgatggacaccagggtccaagaggtgaacaa
ggtctgatggggatgcctggaacccgaggaccacaagggccttctggagacccaggaaag
ccaggtctcaccggaccccaaggacctcagggacttcctggtacccctggccgaccagga
gctaaaggggaacctggagctccaggcaggatcgtgacctcagaagggtcatcgacgatc
actgtcccgggcccgccggggcctcccggagccatgggaccaccaggacctccaggtgcc
ccaggtcctgtgggcccagctggtctccctggacagcaaggcccacgtggggagcgagga
cttactggcgaatctttcatgggcagcagcagctccatcgctgaggtcctttccacccaa
ggtcttgatttacgaggtcccccaggcccacctggaccacctgggcctccaggaccttcc
attccaggcccgccgggaccccgaggcccagcaggagaaggcctgccgggcccaccaggc
ccaccaggatctctcctgaccaattcagagaccttcttctccgggccccccggccccccg
ggaccccccggccccaagggagaccaaggccccccaggcccccggggacaccaaggcgag
caaggcctccccgggttctccacctccggttccagttcccttggactcaacctgcaggga
ccacccggcccccggggacccaagggggacaaaggtgatcctggggtcccaggggctcct
ggcattcctggtggtctctctcaagggggatcgtcgtcaagcacgatgtttgtgccaggc
cccccagggcccccaggccccccagggcccccaggctccatcagtagctctggccgggag
atccagcagtacatctctgagtacatgcagagcgacagcattcgggcctatctctctgga
gttcagggtccccctggaccacctggtcccccagggcctgtcaccaccattgcgggggag
actttcgactactcagagctggcaagccgtgtcgggagctacttgcagacctcggggtac
agcatcagctcctccacctccatctcctctgaggacatcgtggctgtgctgaaacgggat
gacgtgaggcaatatctgcgccagtatctggttggagattggtccctccagtctttggac
tacgctgagctgagcagtcgcgttctcagctacatgtccagctctggaatcagcattggg
cttcctggccctccgggaccccctggcttgccaggaacatcctatgaagagctcctctcc
ttgcttcaagggtctgaatacagaggcatcattgggccccccggcccccctgggccccca
gggatcccaggcaacgtgtggtccagcatcagcgtggaagacctctcttcttacctgcac
actgctggcgtgtcctccatccctggccctccaggccctcctggccctccgggtcctcga
gggcctccaggggtctcgggagctctggcaacctacgcggccgaaaacagcgacagcttc
cggagtgaactgatcagctacctcacgagcccggatgtgcggagcttcatcgtgggcccg
ccgggccctccaggaccccaggggccgcctggggacagccgcctcgtgtccatggacggc
tcctatagccggggcagcaggtcctcctctcacagcgcgtcggtcagccggggctcctcc
tacagctcctccatgggcataggaggatccagtggaggctcccttggtgaagggggggcc
tttggcctggacatgggcctggaccgaggctacgggggagcagcagaaggtggcatgtac
ggtggtgaaggtggactgttcggagctggctttgccggaggtctggactacaacgagctg
gctgttcgggtatctgagagcttgcaacgtcagggcctgctgcaggggatggcctacact
gtccagggcccgccgggccagccagggccccagggcccccccggcatcagcaaggtcttc
tctgcctacagcaatgtgaccgaggacctcatggactttttccgaacttatggagccatt
ccaggcccccctgggcagaaaggagaggtgggcacccaaggacccaaaggtgaaaggggc
cccgcaggaccaccaggccggcctgggccacccgggcctcgagggcacaagggagaaaaa
ggagacaaaggtgaccaagtctatgtggggcggaggaagagaagcgtcggcatcaagcca
tga
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integrated database retrieval system
