Mustela nigripes (black-footed ferret): 132016784
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Entry
132016784 CDS
T09425
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132016784 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132016784 (VTI1A)
Membrane trafficking [BR:
mnp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
132016784 (VTI1A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
Sec20
DUF6987
DUF1664
DUF5344
Mer2
FapA
HAAS
Motif
Other DBs
NCBI-GeneID:
132016784
NCBI-ProteinID:
XP_059254565
LinkDB
All DBs
Position
4:174531746..174882935
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AA seq
228 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRVLTGMLRRDALFTLLLNKECAVVFAVDFYFICKLCVLHATEY
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgacttcgaaggctacgagcaggacttcgcggtgctcacggcagagatcacc
agcaagattgcgagggtcccccgtctcccgcctgatgagaagaagcagatggttgcaaat
gtggagaaacagctcgaagaagcaaaagaactgcttgaacagatggatctggaagtccga
gagataccaccccagagtcgaggaatgtacagcaacaggatgcgaagctacaagcaagaa
atgggcaaacttgaaacagattttaaaaggtcacggattgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaaccgagcaaattggccaggagatgttggaaaacctc
agtcacgacagagaaaagatacagcgcgcacgtgaacgacttcgggaaacagatgctaac
ttggggaaaagctccagggttctgacggggatgttgcgaagagacgctcttttcactctg
ctactcaacaaagaatgtgccgttgtctttgctgtagatttttattttatttgtaaattg
tgcgtgctgcatgctacggaatactga
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