Mustela nigripes (black-footed ferret): 132016802
Help
Entry
132016802 CDS
T09425
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnp03016
]
132016802 (TRUB1)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132016802 (TRUB1)
Transfer RNA biogenesis [BR:
mnp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132016802 (TRUB1)
Prokaryotic type
132016802 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
132016802
NCBI-ProteinID:
XP_059254644
LinkDB
All DBs
Position
4:176714145..176757509
Genome browser
AA seq
350 aa
AA seq
DB search
MAAAEAAVVSSSSLETDRALVPETAGTGAATAATPPATAAAAAVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLLPAELALKKSKPEDSNEQVLSCEYITLSETKGEDDVIKTS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcgtcgtcgtctttggaaacagacagagccctg
gtccctgaaacggcaggaacaggcgcagcaacggccgccaccccaccagcgacggctgca
gctgcggccgttgcagccgctgccagaaccggatccgaagccagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctagcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcaaactttgaaaattggacatggaggcacgcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
agtatgttgtcagggtccaagaggtatattgccattggagaactggggaaagctaccgac
acactagattctactgggaaagtaacagaagaaaaaccttatgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaagtacctcccctctat
tctgcattaaagaaagatggacagagactttcaaccttaatgaagagaggcgaagtagta
gaagcaaaacccgccaggcctgttaccgtatacagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtcctagagctgacccgaaccaaacag
ggaccatttacactagaagagcatgcccttcccgaagacaaatggacgattgatgacatt
gcacagtctctggaacattgctcatcacttctcccagcagagctggcacttaagaaatca
aaacctgaggattctaatgaacaagttttgagctgtgaatatataactctgagtgagaca
aagggagaagatgatgtcattaagacatcttaa
DBGET
integrated database retrieval system
