Mustela nigripes (black-footed ferret): 132017222
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Entry
132017222 CDS
T09425
Symbol
COL9A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04151
PI3K-Akt signaling pathway
mnp04510
Focal adhesion
mnp04512
ECM-receptor interaction
mnp04820
Cytoskeleton in muscle cells
mnp04974
Protein digestion and absorption
mnp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132017222 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132017222 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132017222 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132017222 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132017222 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132017222 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mnp00535
]
132017222 (COL9A1)
Proteoglycans [BR:
mnp00535
]
Extracellular matrix (ECM) proteoglycans
Others
132017222 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
DUF4882
Motif
Other DBs
NCBI-GeneID:
132017222
NCBI-ProteinID:
XP_059255005
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Position
5:38127839..38220400
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AA seq
931 aa
AA seq
DB search
MKTQWKIPVFFFVCSFLGSWASAAVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI
SQFQVDKAASRRAIQRIVGSTALQVAYKLGNNIDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTATFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIQSLPIKPRGQIDIDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPVRITPSETTDQRGPPGQQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGEPGKPGAPGRPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHEGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIVGAK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDMGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKTGQL
GNSGKPGQQGPPGEVGPRGPRGLPGSRGEIGPEGPTGPPGKRGSPGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGVQGSSGEEGEAGERGELGEIGLPGPKGSVGNPGEPGLRGPEGSR
GLPGVEGPRGPPGPRGMQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHLAEMAAS
LRRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGER
GERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQLGNGHLAKGPIREKLSAAWPSA
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaatggaaaattccagttttcttctttgtatgcagtttcctgggatcttgg
gcatctgctgctgtcaagcgtcgcccaaggttccctgttaattcaaattctaatggtgga
aatgaactctgtccaaaggtcaggattggccaagatgatttaccaggctttgacttgatt
tctcagttccaggtagataaagcagcatctagaagagctattcagaggatagtgggatca
actgcattacaagtggcttataaattgggaaataatatagacttcaggattccaacaagg
catttatatcccagtggtctgcctgaagaatactcctttttaactacttttcggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgttgcattttcatacaagggactg
gatggaagtctccaaactgcaaccttttcaaatctgccttccttgtttgattcccagtgg
cataagatcatgatcggtgtagaaaggagtagtgctactctttttgttgattgcaacagg
attcaatccttacctataaagccaagaggccaaatcgacattgatggcttcgctgtgctg
ggaaaacttgcagataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc
cattgtgacccactacgtcccaggagagaaacttgccatgagctgccagtccgaataact
cccagcgagaccaccgaccagagaggtcccccgggccagcagggtccccccgggcccccg
ggtccccctggagttccaggcatcgatggcatcgacggtgaccgaggtccaaagggtccc
ccgggccccccgggtcctcctggagaacccggcaagccaggagctcccggcaggccaggc
acgcccggtgcagacggattaacaggacctgatggatcccctggttctgttggaccaaga
ggacaaaaaggagaacctggtgttcctggatctcgtggatttccaggccgtggtattcct
gggccccctggtcctcctggggcagcaggactccctggagagcttggccgtgttggacca
gttggtgaccctgggagaagaggaccgcctgggccccctggccctccaggacccagtgga
acaattggctttcatgaaggagatcccttgtgtcccaattcctgtccaccaggtcgctca
ggatatccaggcttaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
cctggaagacaaggtcacaagggtgaagaaggggaccaaggggaacaaggagaagttgga
gctcagggacctccaggagcccagggattaagaggcatcactggcatagttggggccaaa
ggagaaaaaggtgctcggggcttagatggagaacctgggcctcaaggtcttcctggtgca
cctggtgaccaaggacagagaggacctccaggagaaataggtcccaagggagatagaggg
cctcaaggttctagaggaattcctggcctccctggaaccaaaggagacatgggcttgcca
ggtgtggatggccgtgacgggatacctggaatgcctgggacaaagggtgaacccgggaag
cctgggcctcctggtgatgcaggattgcagggcttacctggtgtacctgggattcctggt
gcaaagggtgttgctggtgaaaagggtaacacaggtgctcctgggaagactggtcagttg
gggaattcaggcaaaccgggccaacaagggcctccaggagaggtgggaccccgaggaccc
agagggcttcctggcagtagaggagaaataggaccggagggacccacagggccacccggt
aaacggggttctcctggcagtcctggcctccctggcttgcctggcccccctggccttccg
ggaatgaaaggcgacaggggagtagtcggtgagcctggtccaaagggtgtacagggttcg
tctggtgaagaaggtgaagcaggagaaaggggtgaacttggagagataggcttacctggg
ccaaagggatctgtgggtaaccctggggagcccggcttgagggggcccgaaggaagtcgg
gggcttcctggagtggaaggaccgagaggaccgcctggaccacgaggcatgcagggagag
cagggtgccaccggcctgcctggcatccagggccccccaggtagagcaccgacagatcag
cacattaagcaggtttgcatgagagtcatgcaagagcatcttgctgagatggctgctagt
ctcaggcgaccagactcaggagcctctggcctccctgggaggcctggaccccctggtccc
ccagggccacctggagagaatggtttcccaggccagatgggacttcgtggccttccaggc
attaaaggccctcctggtgctcttggtttgagggggcctaaaggtgacttgggagaaaga
ggggaacgtggccctccaggaagaggtccgaagggcttgcctggagcaacaggtctccca
ggtgaaccaggtcctgccagctacgggaggaacggccgggatggcgagcgagggccccca
ggggtggcaggaattcccggggtacctggccccccgggccctcctggccctcctgggttt
tgcgagccagcttcctgcaccctgcagctgggcaacgggcatttagcaaagggcccgatc
cgtgaaaagcttagtgctgcgtggccgtctgcataa
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