Mustela nigripes (black-footed ferret): 132017223 Help Entry 132017223         CDS       T09425                                  Symbol COL19A1 Name (RefSeq) collagen alpha-1(XIX) chain   KO K24340   collagen type XIX alpha Organism mnp  Mustela nigripes (black-footed ferret) Pathway mnp04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:mnp00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     132017223 (COL19A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mnp00536]     132017223 (COL19A1) Glycosaminoglycan binding proteins [BR:mnp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132017223 (COL19A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Motif Other DBs NCBI-GeneID:  132017223 NCBI-ProteinID:  XP_059255006 LinkDB All DBs Position 5:complement(38228985..38537371) Genome browser AA seq 1139 aa AA seqDB search MKHAGSWKIWLWVVMLLLPASISVTVRDKSEKQCPLLRTEGHPFTQDNKNKLEVSGFDLG ERFSLRRAFCEGDKTCFKLGSAFLVRDTIKIFPKGLPDEYAIAAMFRVRRSTKKERWFLW QVLNQQNIPQVSMVVDGGKKVVEFMFRAPEGDVLNYIFKNRELRPLFDRQWHKLGIGIQS RDISLYMDCNLIASRHIDEKDTVDLRGKTVIAARASDGKPVDIELHQFKIYCNSNFIAQE TCCEISDTKCPEQDAYGSAASSLLPAHAGRMSAYLPATQELQDRCQCIPNKGEAGLPGTP GSPGQKGDKGEPGENGLHGAPGLPGQKGEQGFEGSKGETGEKGEQGEKGDPGLAGINGQN GLKGDLGPRGPPGPKGEKGDTGPPGPPALTGSVGIQGPQGPPGKEGQRGRRGKTGPPGKP GPPGPPGPPGIQGVQQTLGNYNKGKLGEYEARGPKGEKGETGQPGFPGSIGPKGQKGESG EPLTKGEKGDRGEPGLMGSQGLKGEPGDPGPPGLIGSPGLKGPQGPAGSMGPRGPPGDIG LPGEHGIPGKQGIKGEKGDAGGIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGTPGPRG PKGERGLPGVHGSPGDRGPPGVGVPGRTGSQGPAGEPGIQGPRGLPGLPGTPGTPGNDGA PGRDGKPGLPGPPGDPIALPLLGDIGVLLKNFCGNCQASVPGMKSNKGEETGAGEPGKYD STAQKGDTGPRGPPGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGLPGAPGPTGPPG LLGRTGHPGATGAKGDKGSEGPPGRPGPPGPPGVPFNEGNGMSSLYKIQGGVNVPSFPGP PGPPGPKGDPGPVGEPGAMGLPGLEGFPGIKGDRGPAGPPGIAGISGKPGAPGPPGVPGE PGDRGPVGDIGFPGPEGPSGRPGINGKDGLPGAQGVMGKPGDRGPKGERGDQGIPGDRGP QGEQGKPGLPGMKGAIGPVGPPGNKGSTGSPGHQGPPGNPGIPGTPADAVSLEEIKKYIN QEVLRIFEERMAVFLSQLKLPAAMLAAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQKGER GEPGIGLPGSPGLPGTSAPGLPGSPGAPGPQGPPGPSGRCNPEDCLYPVSHARQRTGGK NT seq 3420 nt NT seq  +upstreamnt  +downstreamnt atgaagcatgctggctcttggaaaatttggctctgggtggtaatgcttctgcttcctgct tccatttccgtgacggtcagggacaagtcagaaaaacagtgtcctttactgagaacagag ggacatccgtttacccaggacaacaaaaataaacttgaagtttcaggttttgacctcggg gagcgcttttctttgagacgtgcattttgtgaaggtgataaaacctgtttcaaattggga agtgcatttcttgttagagataccattaagatatttcccaaaggccttcctgatgagtac gccatagcagctatgtttcgagtacgaagaagtaccaaaaaggaacgatggtttctgtgg caggttttaaaccagcagaatataccacaggtttctatggtagttgatggtggaaagaag gtggtggaatttatgttccgagctcctgagggagatgtgttgaattacatttttaaaaat cgagaactccgtcctttgtttgatcgtcagtggcataaacttggcattggtattcaatcc cgggacatttcactctatatggattgtaatttaattgcaagccggcatatagatgaaaag gacactgtggaccttcgtggaaagactgtaattgcggcacgagcttccgatggcaagcct gtggacattgagcttcaccagtttaaaatctactgtaactcaaacttcatagcacaagaa acatgttgcgaaatatcagacaccaagtgtccagagcaggatgcctatggaagtgctgca tcatcattgttacccgctcatgccggtagaatgtctgcctatctgccagcaacgcaggaa cttcaagaccggtgccagtgcattccaaacaagggagaagcaggattgccaggaactcca ggctcacctggccagaaaggagataaaggagaaccgggtgaaaatggtttacatggagct ccaggcttacctggtcaaaagggagagcaaggttttgaaggcagcaaaggagaaactggt gaaaagggtgaacaaggagaaaaaggagatccaggtctggctggcattaatggacaaaat ggtttaaaaggtgacttgggtcctcgtggtccacctggccccaaaggagaaaagggagat acaggacctccaggaccaccagccttaactggttccgtggggatacaaggcccacagggt ccacctggaaaagaaggtcaaaggggaagacgaggaaaaacaggtcctccaggaaaaccg ggtcccccaggaccacctggacctcccggtatacaaggagtacaacagactcttgggaat tataacaagggaaaacttggtgaatatgaagctcgtggcccaaaaggagagaagggtgaa actggacaaccaggattcccagggtccattggccctaaaggtcaaaaaggagaatcggga gaacctcttactaaaggtgaaaagggagatagaggagaacctgggctaatggggtcacag ggactaaagggcgaacctggagatcctggtccccctggtttaataggaagcccaggacta aagggtccacaaggacctgcaggctctatgggacccagaggaccaccaggagatattgga ttgccaggagaacatggtatcccgggaaagcaaggcattaaaggagaaaagggagatgca ggtgggattataggccctcctgggcttccaggtccaaaaggtgaggctggtcctccaggg aaaagcctgccgggggaaccgggtttagatggaaatcctggaacccctggtcctcgtggg ccaaagggcgagcgaggactgccaggcgtccacggttccccaggtgacagaggccccccg ggagtgggggttcctggccgaacaggctcccaaggaccagctggagagccaggtatccag ggtcctcgcggtctccctggattgccaggaactccagggaccccagggaatgatggagct ccgggaagggatggaaagccaggtctgccaggccccccaggtgacccgatcgcacttcct ctcttgggggacatcggtgtcttgctcaagaacttctgcggcaactgccaagccagtgtt cccgggatgaaaagcaacaaaggagaagaaactggcgctggtgagcctggaaagtatgat tccaccgcccagaagggtgatacaggcccacggggtcctccaggaatcccaggcagggag gggccaaagggaagcaaaggagagcggggctacccggggatacctggagagaaaggtgat gagggccttcaaggaattccaggccttccaggtgccccaggtcccactggaccccctggc ttgttgggaagaactggacatcccggtgccacgggagcaaagggtgacaagggcagtgag ggacccccggggagacctggaccacccggaccaccgggtgtaccattcaatgaaggaaat ggaatgagcagtttgtataaaatccagggaggtgtgaatgttcccagttttccaggcccc ccgggtccccctggcccaaaaggagaccctggcccagtgggagaacccggtgcaatgggg ttgccaggattagaaggatttccgggtataaagggggatcgaggcccagcaggtccccca ggaatagctggaatatcgggaaaacctggagccccagggcctccgggagtcccaggggaa ccgggtgacagagggcctgttggagatataggtttccctggaccagaaggaccctctgga aggccaggaataaatggaaaagacggattgcctggtgctcagggtgtcatgggtaaacct ggagacagaggccccaaaggagaacgtggtgaccagggaattccaggagacagaggccca cagggtgaacaggggaaaccaggccttccaggcatgaagggagccataggtcctgtgggg ccacccggaaacaagggctccacgggatcccccggacaccaaggccctccaggcaatcca ggcatcccaggcactccagctgatgcggtttcattggaagaaataaagaagtatattaat caagaggttctaaggatttttgaagagaggatggccgtgttcctatcgcagctcaagctg ccagcggcaatgctggctgctcaggctcatggaaggcctggtccaccaggaaaggatgga ttacctgggccgccaggagaccctgggccccaaggctaccgaggacagaagggagaaaga ggggagcctggcattgggctcccagggagtccaggtcttcctgggacttcagctccgggt ttgccaggctcaccaggtgccccaggtccccagggccccccaggacctagtggaagatgt aatccagaagattgcctctatcctgtgtctcatgcccgtcagcggacaggtgggaaataa

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