Mustela nigripes (black-footed ferret): 132017618
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Entry
132017618 CDS
T09425
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03083
Polycomb repressive complex
mnp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132017618 (JARID2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
132017618 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132017618 (JARID2)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
132017618 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
132017618 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
132017618
NCBI-ProteinID:
XP_059255464
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Position
5:14756491..15013309
Genome browser
AA seq
1270 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGIAGSLKTVN
GLLGNGQSKGLGPASEQSENEKDDASQVSSASNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKVVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKAAANNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSTREKEPVQK
HKSKEATPGKEKHSDHRADSRREQASAAHPPAAPSTGSSAKGLAANHHHPPLHRSAQDLR
KQLSAGPLKTRTGQGGGTCVCRQVSKVNGVTRMSSLGTSATSAKKMREVRPSPSKTVKYT
ATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKS
TGHAVNGLKVSGRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQAEKPQSPPKKMKGTAG
AVEAPGRKVAAAPAAPAPAEKALLHGHVKKEVPERSLERNRPKRATAGKSVPGRQAHGKM
DGASCENRSTSQTEPLHKPHEAAAKPDKGGGRAGWAAMDEIPVLRPSAKEFHDPLVYIES
VRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLR
SQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAK
LQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTEHDYNKFHPLPRFEP
KNGLINGVAHRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVAREEEEDKGVLSDFHKCIYK
GRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSG
FPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLP
YIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIK
VHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPF
SMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGN
GAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCR
GLKLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSSS
GSSRSASSSS
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccatggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaatgcccagaagaggcagcacggggaaggcattgctgggagcctgaaaacggtgaat
gggctccttggtaatggccagtctaagggattaggaccagcgtcagaacagtcagagaat
gagaaggacgatgcatcccaagtgtcctctgctagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcagtct
cagccgaacagccctagcacaactccggtcaaggtagtggagccattgctgccccctcca
gctactcagatttctgacctctctaaaaggaagcccaagacagaagactttcttaccttt
ctctgccttcgaggttctcctgcactgcccaacagcatggtgtatttcggaagctctcag
gacgaggaggacgtcgaggaggaagacgatgagacggaagacgtcaaagcagccgccaac
aatgcttcatcttcatgccagtcaacccccaggaaaggaaaaacccacaagcatgttcac
aatgggcatgttttcaatggttccagcaggtcaacacgggagaaagaacctgttcaaaaa
cacaaaagcaaagaggccactcccgggaaggagaagcacagcgatcaccgggctgacagc
cggagggaacaggcctcagcggcccacccaccagcggccccatccacgggctcctcggcc
aaggggctcgctgctaaccaccaccacccccctctgcatcggtcggctcaggacttacgg
aaacagttgagtgctggacccctgaagacaaggacaggccaaggaggaggcacgtgcgtg
tgcagacaggtttcgaaggtaaatggagtcactcgaatgtcatctctgggtacaagtgca
accagtgccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtacact
gcaacggtgacgaaggggactgtcacatacaccaaagccaagagagaactggtcaaggaa
accaaacccaatcaccacaagcccagttccgctgtcaaccacacaatctcagggaaaact
gaaagtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaagtcc
accgggcacgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcact
aaggaggtgggggggcggcagctgagggaggggctgcggaactccaagaggagactggaa
gaggcacagcaggctgagaagccgcagtccccgcccaagaagatgaaagggacggcgggc
gctgtcgaagcccccggcagaaaggtggcggcggcccccgcggcgccagcccccgcggag
aaggctctgctgcacgggcatgtgaagaaggaggtgcccgagcggagtctggaaaggaac
cggccgaagcgggccacggctggcaagagcgtgccaggcagacaagcacacggcaagatg
gatggcgcctcctgtgaaaatcgttctacctcgcaaacggagcccttgcacaagccgcac
gaggcggcggccaagcccgacaaggggggcggccgggccggctgggcggccatggacgag
atccccgtgctcaggccgtccgccaaggagttccacgacccactcgtctacatcgagtcg
gtccgcgctcaggtggagaagtacggcatgtgcagggtgatcccccctccggactggcgg
cccgagtgcaagctcaacgacgagatgcggttcgtgacgcagattcagcacatccacaag
ctgggccggcgctggggccccaacgtgcagcggctggcctgcatcaagaagcacctcaga
tctcagggcatcaccatggacgagctcccgctcataggaggctgcgagctcgacctggcc
tgctttttccggctgattaacgagatgggcggcatgcagcaagtgactgacctcaaaaaa
tggaacaaactagcagacatgctgcgcatccccaaaacggcccaggaccggctggccaag
ctccaggaagcctactgccagtacctgctctcctatgactccctgtcccccgaggagcac
cggcggctggagaaggaggtgctgatggagaaggagatcctggagaagcggaaggggccc
ctcgagggccacacggagcacgactacaacaagttccaccccctgccccgcttcgagccc
aagaacgggctcatcaacggcgtggcccacaggaacggcttccgcagcaagctcaaagag
gtgggccaggcccagctcaagacgggccggcggcgactctttgctcaggaaaaggaagtg
gcgcgagaggaggaggaggacaagggcgtcctaagtgacttccacaagtgcatatacaag
ggaagatccgtttctttaacgactttttatcgaacagcaagaaatatcatgaacatgtgc
ttcagcaaggagcccgcccctgctgaaatcgagcaagagtactggaggttagtggaagag
aaggactgccacgtggctgtgcactgcggcaaggtggacaccaacacgcacggcagcggg
ttcccggtggggaagtcagaaccgttttcaaggcatggatggaacctcaccgtccttccc
aataacacagggtccatcctgcgtcacctcggtgctgtgcctggagtgacaattccctgg
ctaaacattggcatggtcttttctacctcatgctggtctcgagaccaaaaccaccttccc
tacattgactacttacacactggtgctgactgcatttggtattgcattcctgctgaggag
gagaacaagctcgaggatgtggtccacaccctgctgcaggccaacggtaccccagggctg
cagatgctggaaagcaacgtcatgatctccccggaggtgctgtgcaaagaggggatcaag
gtgcacaggaccgtgcagcagagtggccagttcgtcgtctgcttcccgggctcctttgtg
tccaaagtgtgctgtggctacagcgtctctgagaccgtgcactttgccaccacccagtgg
acaagtatgggcttcgagacggccaaggaaatgaagcgtcgccatatagctaagccattc
tccatggagaagttactctaccagattgcacaagcggaagcgaaaaaggaaaacggcccc
actctcagtaccatctccgcccttctggatgagctcagggacacggagctgcggcagcgg
cggcagctgttcgaggccggcctccactcgtccgcccgctacggcagccacgacggcaac
ggcgccatggcggatggcaagaaaaagcctcgaaagtggctgcagttggagacgtcggag
aggaggtgtcaggtctgccagcacctgtgctacctgtccatggttgtgcaggagaacgag
aacgtggtgttctgcctggagtgcgccctgcgccacgtggagaagcagaagtcctgccga
gggctgaagctgatgtaccgctacgatgaggaacagatcatcagtctggtcaatcagatc
tgtggcaaagtgtctggtaagaacggcagcattgagaactgtctcagcaaacctacacca
aaaagagggccccgcaagagagcgaccgtggacgtgccgccgtcccggctctcatcctcc
ggctcatccagaagtgcttcgagctcgtcgtga
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