Mustela nigripes (black-footed ferret): 132017628
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Entry
132017628 CDS
T09425
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132017628 (KDM1B)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
132017628 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
Pyr_redox
Thi4
HI0933_like
DAO
SWIRM
Pyr_redox_3
FAD_binding_3
Lycopene_cycl
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_9
2-Hacid_dh_C
AlaDh_PNT_C
TrkA_N
NAD_binding_7
KARI_N
zf-RING_2
YjeF_N
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
132017628
NCBI-ProteinID:
XP_059255497
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All DBs
Position
5:17209742..17269998
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AA seq
874 aa
AA seq
DB search
MATPRRRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRRCEKSGCTV
ACPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYMAWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIHLTPQIARTYRCGMKLNTTIKPE
TSDHCSLPEDLRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCASTHRA
AGSSSPGKLEHSKGVPSSLVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLTLALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLI
NTGVLSVGTDQHLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW
DDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKR
MDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFITESGVQFSELEEQVLHFHLSN
LEYACGSSLRQVSARSWDHNEFFAQFAGDHTLLMPGYSVIIEKLAEGLDIRLESPVQSID
YSGDEVQVTIMDGTGYTAQKVLVTVPLALLQKGAIHFNPPLSEKKMKAINSLGAGIIEKI
ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKQHSVLMSVVAGEAVASVR
TLDDKQVLQLCMAVLRELFKEQSVAVRWGTAQNVDRGTDLHVIPAEAGLVSCAVPVGVCA
LQPAPRPCSPGDGGSSAFPRRPGLPHTPASFDSFPSEGMLSRIFAHPTDAARPFSVFFLR
GAQGPCYLPGYQISPFLETWKWCGFHLFQIKEWE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccacggaggaggacaaagaaaaaagcatcttttgatcattccccggatagc
ctgcctttgaggagctccggtaggcaggcgaagaagaaagccacggagacgacagacgag
gacgaagatggcgggtcagagaagaaatacaggagatgtgagaagtcgggctgcactgtc
gcgtgtcccgtgtgctttgcaagcgcttcggaaagatgtgccaaaaacggctacacgtcc
cgatggtatcacctctcctgcggggagcatttctgtaacgaatgctttgaccattactac
cgaagccataaggacggatatgacaaatatatggcctggaaaaaaatatggactagcaat
ggaaaaaccgaacctagtcccaaagctttcatggcggaccagcagctcccctactgggtt
cagtgtacaaaacccgagtgcagaaaatggagacaacttaccaaggaaatccatctcact
ccacagatcgcaaggacctacagatgtggtatgaaattgaatactactattaagcccgag
acctcagaccattgttcccttccagaggatctaagagtgtcggaagtgtccaaccactgg
tggtactccatgctcatcctccctcccttgctgaaggacagcgtggccgcacccctgctc
tctgcctactaccccgactgcgtgggcatgagcccgtcttgcgccagcacccaccgcgca
gccggcagcagcagccccgggaagctggagcactccaagggcgtcccctcctcgctggtt
ccaggcatgaaccggtacttccagcccttctaccagcccaatgagtgtggcaaagccctg
tgcgtgcggccggacgtgatggagctggacgagctctacgagttcccggagtactcccga
gaccccaccatgtacctggctttgcggaacctcaccctcgccctgtggtacactaactgc
aaagaagctcttacccctcagaaatgtattcctcacatcattgtccggggtctcgtgcgt
atccggtgcgtgcaggaagtggagaggatcctttattttatgacgaggaaaggtctcatc
aacacgggagttctcagcgtcggcaccgaccagcatcttcttcctaaagattaccacaac
aaatctgtcatcattatcggggctggtccagcaggattagcagctgctaggcaactgcat
aactttggaattaaggtaactgtcttggaagccaaagaccgaattggaggccgagtatgg
gatgataaatcttttaaaggcgtcacagtgggaagaggagcccagattgtcaacggctgt
atcaacaacccagtagcactaatgtgtgaacaacttggcatcagcatgcataaatttgga
gagagatgtgacttaattcaggaaggtggacgaattacggaccccaccattgacaagcgc
atggattttcattttaatgctctcttggatgttgtctctgagtggaggaaggataagact
cagctccaagatgttcctttaggagaaaagatagaggagatctacaaagcgttcatcacg
gagtccggcgtccagttcagtgagctcgaggagcaggtgctacacttccacctgagcaac
ctggagtacgcctgcggcagcagcctccgccaggtgtctgctcgctcctgggaccacaac
gaattctttgcccagttcgctggtgaccacactctgctaatgcctggctactccgtaatc
attgagaaactggcagaaggcctagacattcggctcgagtctccagtacagagcattgac
tattctggagatgaagtgcaggttaccattatggatgggacagggtatacagcacaaaag
gtattagttacggtcccactggccttactgcagaagggtgccatccactttaacccacca
ctgtcagaaaagaagatgaaggctatcaacagcttaggtgcaggcatcattgaaaagatt
gccttgcaattcccttaccgattttgggacagtaaagttcaaggggctgacttttttggt
cacgtacctcctagcgccagcaagcgggggcttttcgctgtgttctatgacatggatccc
cagaagcagcacagcgtgctgatgtcggtggtcgccggggaggccgtggcgtccgtcagg
accctggacgacaagcaggtgctgcagctgtgcatggctgtgctccgggagctgttcaag
gagcagagcgtggctgttcgctggggaactgcccagaatgtggaccgcggcacggatttg
cacgtcattcctgcagaggccgggctggtctcctgtgcggttcccgtgggagtgtgtgcg
ctgcagccggcgccgcggccctgctctcccggggatggcgggagctccgcgtttccccga
cgtccgggattaccccacaccccagcaagctttgacagcttcccttctgaaggaatgttg
tccagaattttcgcccaccccacagacgcagctcgtcccttctctgtcttttttctccga
ggagctcagggtccgtgctatttgccaggctaccaaatctcaccatttctggagacctgg
aaatggtgcggcttccatcttttccaaataaaggagtgggagtag
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